DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dpa and mcm7

DIOPT Version :9

Sequence 1:NP_001286160.1 Gene:dpa / 35679 FlyBaseID:FBgn0015929 Length:866 Species:Drosophila melanogaster
Sequence 2:NP_997734.1 Gene:mcm7 / 192333 ZFINID:ZDB-GENE-020419-27 Length:721 Species:Danio rerio


Alignment Length:739 Identity:251/739 - (33%)
Similarity:377/739 - (51%) Gaps:95/739 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   165 KSKFKSFIMRF-------------------------------IDPSAEQD-EISENIDVNQPLYL 197
            |.|.|.|:..|                               :|..||:| ::.|::..|...|.
Zfish    10 KEKCKRFLQEFYTEDDSGKKIFKYGAQLVSLAHREQVALLVDLDDVAEEDPDLVESVCENAKRYT 74

  Fly   198 QKL-EEIHTLEEPYLNLNCAHLKTFDQDLYRQLICYPQEVIPGFDMAINEMFFERYPAALLEH-Q 260
            ... :.||.|...|...........|..:..:|:.    .:.|.|.|......::||..|:.. :
Zfish    75 ALFADAIHELLPEYREREAVVKDALDVYIEHRLMM----EVRGRDPADTRDHRKQYPPELMRRFE 135

  Fly   261 IQVRPFNADKTRNMRSLNPEDMDQLISISGMVIRSSNVIPEMREAFFSCNICSFSTTVEVDRGRI 325
            :..||....|.|.:|.:..:.:.||:::.|:|.|::.|.|.|..|.::|:.|...|...:.....
Zfish   136 VYFRPPATLKPRVVRDVKADSIGQLVTVRGIVTRATEVKPMMAVATYTCDQCGAETYQPIASPSF 200

  Fly   326 NQPTLCTN--CNTNHC---FRLIHNRSEFTDKQLVKLQESPDDMAAGQTPHNVLLYAHNDLVDKV 385
            ....:|.:  |.||..   ..|....|:|...|.:::||..|.:..|..|.::.:||..:.....
Zfish   201 TPLIMCPSQECVTNKSGGRLYLQTRGSKFIKFQELRIQEHSDQVPVGNIPRSMTIYARGENTRVA 265

  Fly   386 QPGDRVTVTGIYRATPLKTGGLSSSVKSVY-KTHVDVVHFRKVDNKRLYEDEEGKDHIFPPERVE 449
            ||||.|.|:|::  .||...|...:|:.:. :|::: .|...:.|| ..:||.|.:.:...|..:
Zfish   266 QPGDHVAVSGVF--LPLLRSGFRQAVQGLLSETYLE-CHSITLMNK-TEDDELGTEELSDEELRQ 326

  Fly   450 LLQLLAKKPDIYDRLARAIAPSIYENDDIKKGILLQLFGGTKKKHATLGRQNFRSEIHLLLCGDP 514
            :.:     .|.|::||.:|||.||.::|:||.:||.|.||.::  |..| ...|..|::.|.|||
Zfish   327 ITE-----EDFYEKLAGSIAPEIYGHEDVKKALLLLLVGGVEQ--APRG-MKIRGNINICLMGDP 383

  Fly   515 GTSKSQMLQYVFNLVPRSQYTSGRGSSAVGLTAYVTKDPETRQLVLQTGALVLADNGVCCIDEFD 579
            |.:|||:|.|:..|.||||||:|||||.|||||.|.:||.|.::.|:.|||||||.|||||||||
Zfish   384 GVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVMRDPVTGEMTLEGGALVLADLGVCCIDEFD 448

  Fly   580 KMNDSTRSVLHEVMEQQTLSIAKAGIICQLNARTSILAAANPAESQWNKRKNIIDNVQLPHTLLS 644
            ||.|:.|:.:||||||||:|||||||:..||||.|||||||||..::|.||:|..|:|||..|||
Zfish   449 KMADADRTAIHEVMEQQTISIAKAGIMTSLNARCSILAAANPAYGRYNPRKSIEQNIQLPAALLS 513

  Fly   645 RFDLIFLVLDPQDEIFDKRLASHLVSLYYVTRHEEED----TMFDMSVLRDYIAYAREHLSPTLS 705
            ||||::|:.|..|...|.|||.|:.   ||.:|..:.    |..||.::|.||:..::. .|.:.
Zfish   514 RFDLLWLIQDRPDAESDLRLAQHIT---YVHQHCRQPPTHFTPIDMKLMRRYISKCKQK-QPVVP 574

  Fly   706 DEAQQRLIQAYVDMRK-VGAGRGQISAYPRQLESLIRLSEAHAKVRLSNQVELLDVEEAWRLHRE 769
            :.....:..|||:||| ....:.......|.|.|::|||.|.|::|:.:.||..||.||.|| .|
Zfish   575 ESLSDYITAAYVEMRKEARVSKDTTFTSARTLLSILRLSTALARLRMVSVVEKEDVNEAMRL-ME 638

  Fly   770 ALKQSATDPLSGKIDVGILTTGLSTAARKKR-ADLVAAIKENL--KKKGKVLTVPYQKLFSDIKE 831
            ..|.|             |....|:::|.:| ||::.::...|  :..|:.:.|         ..
Zfish   639 MSKDS-------------LQADRSSSSRAQRPADVIFSLLRELCGESAGRSVRV---------SA 681

  Fly   832 GSQIMITR----EQFEDALKEVQD 851
            ..|..::|    .||:.||:|.::
Zfish   682 AEQRCVSRGFTPAQFQAALQEYEE 705

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpaNP_001286160.1 PHA03307 2..>150 CDD:223039
MCM_N 168..267 CDD:379644 24/132 (18%)
MCM 270..772 CDD:214631 207/512 (40%)
mcm7NP_997734.1 MCM_N 14..93 CDD:317013 14/78 (18%)
MCM_OB 145..641 CDD:330264 207/512 (40%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D232729at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.920

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