DRSC/TRiP Functional Genomics Resources

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Protein Alignment dpa and mcm-7

DIOPT Version :10

Sequence 1:NP_477185.1 Gene:dpa / 35679 FlyBaseID:FBgn0015929 Length:866 Species:Drosophila melanogaster
Sequence 2:NP_504199.1 Gene:mcm-7 / 178831 WormBaseID:WBGene00003159 Length:730 Species:Caenorhabditis elegans


Alignment Length:726 Identity:236/726 - (32%)
Similarity:373/726 - (51%) Gaps:81/726 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   169 KSFIMRFIDPSAEQD-----EISENIDVNQPLY--LQKLEEIHTLEEPYL-NLNCAHLKTFDQDL 225
            |..|:..:|...|.|     |:||.|..|...|  |.| :.|..:.:.|| :.....:...|..:
 Worm    50 KQAIVVNVDHIKESDIPDALELSEAITSNTKRYEVLFK-DTISDMIQDYLGDKQAPVIDALDAYM 113

  Fly   226 YRQLICYPQEVIPGFDMAINEMFFERYPAALLEH-QIQVRPFNADKTRNMRSLNPEDMDQLISIS 289
            :::|.....|.....::::.:. .::||..||:. ::.....:|.....:|::...::..|:|:.
 Worm   114 FQRLHMDRNEGAANEEVSLQDK-RKKYPPQLLQRFEVYFTTDDAAHETCVRNIKATEIGHLVSMK 177

  Fly   290 GMVIRSSNVIPEMREAFFSCNICSFSTTVEVDRGRINQPTLCTNCNTNHCFRL-----IHNR--- 346
            |:|||::.|.|.:....::|:.|:......|...:...|   .||....|...     :|.:   
 Worm   178 GVVIRATEVKPCVEVMTYTCDTCAAEVYQPVKGMQFTPP---VNCPNKECVEAKANGRLHMQLRG 239

  Fly   347 SEFTDKQLVKLQESPDDMAAGQTPHNVLLYAHNDLVDKVQPGDRVTVTGIYRATPLKTGGLSSSV 411
            |:|...|.:|:||..:.:..|..|..:.::.:.::..|...|:.|.|:|::  .|:...|...:.
 Worm   240 SKFVKFQELKIQELSEQVPVGSIPRTMTVHVYGEMTRKCNTGNVVHVSGVF--LPIMQSGFRPTG 302

  Fly   412 KSVYKTHVDVVHFRKVDNKRLYEDEEGKDHIFPPERVELLQLLAKKPDIYDRLARAIAPSIYEND 476
            ..|..|:::..:...:|:...:...:..:          |::|.:|.|.|:.||.:|||.|:.:.
 Worm   303 GLVADTYLEAHYINNLDDNPTFNGVQSAE----------LEVLRRKGDNYETLAASIAPEIFGHV 357

  Fly   477 DIKKGILLQLFGGTKKKHATLGRQNFRSEIHLLLCGDPGTSKSQMLQYVFNLVPRSQYTSGRGSS 541
            |:||.:|:.|.||...   :......|..|::|:.||||.:|||:|.||..|.||||||:|||||
 Worm   358 DVKKCLLMALVGGNDN---SSNGMKIRGCINVLMMGDPGVAKSQLLGYVNRLAPRSQYTTGRGSS 419

  Fly   542 AVGLTAYVTKDPETRQLVLQTGALVLADNGVCCIDEFDKMNDSTRSVLHEVMEQQTLSIAKAGII 606
            .|||||.|.|||.|.::.|:.|||||||.|:|||||||||.|..|:.:||||||||:|||||||:
 Worm   420 GVGLTAAVMKDPVTGEMSLEGGALVLADGGICCIDEFDKMMDHDRTAIHEVMEQQTISIAKAGIM 484

  Fly   607 CQLNARTSILAAANPAESQWNKRKNIIDNVQLPHTLLSRFDLIFLVLDPQDEIFDKRLASHLVSL 671
            ..|||||:|:||||||..::|..::|..||.||..||||||||.|:.|..|...||.||.|:.  
 Worm   485 TTLNARTAIIAAANPAYGRYNPNRSIEQNVDLPAALLSRFDLILLMQDKADRENDKILAEHIT-- 547

  Fly   672 YYVTRH-----EEEDTMFDMSVLRDYIAYAREHLSPTLSDEAQQRLIQAYVDMRK-VGAGRGQIS 730
             ||.:|     .|:..:..:..||:||:..:.: :||:....::|:::|||:||: .........
 Worm   548 -YVHQHGCHPNREKKDLISLETLREYISLCKTY-TPTVDPALRERIVEAYVEMRRDARYSSDPTF 610

  Fly   731 AYPRQLESLIRLSEAHAKVRLSNQVELLDVEEAWRLHREALKQSATDPLSGKIDVGILTTGLSTA 795
            ..||.:..::|::.|.||:|||..|:..|||||.||.:.|  :.:..|...||:           
 Worm   611 VSPRMILGIVRMATARAKLRLSTIVDESDVEEALRLMQFA--KDSLRPEQNKIE----------- 662

  Fly   796 ARKKRADLVAAIKENLKKKGKVLTVPYQKLFSD-----IKEGSQIMITREQFEDALKEVQDE--- 852
              |:.|.:.||.        .||...|.   :|     |....|....:...|.|||:..|:   
 Worm   663 --KRMAPVDAAF--------AVLRELYH---ADNAPIAISNAIQRCARKGISEVALKKCLDQYTA 714

  Fly   853 GAIVVMGKNTI 863
            ..::||.:..|
 Worm   715 NGLLVMDRQNI 725

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpaNP_477185.1 PHA03307 2..>150 CDD:223039
MCM_N 165..267 CDD:464206 23/106 (22%)
MCM 270..772 CDD:214631 191/515 (37%)
mcm-7NP_504199.1 MCM_N 14..107 CDD:464206 16/57 (28%)
MCM 162..651 CDD:475121 191/512 (37%)
Blue background indicates that the domain is not in the aligned region.

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