DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dpa and Mcm4

DIOPT Version :10

Sequence 1:NP_477185.1 Gene:dpa / 35679 FlyBaseID:FBgn0015929 Length:866 Species:Drosophila melanogaster
Sequence 2:NP_032591.3 Gene:Mcm4 / 17217 MGIID:103199 Length:862 Species:Mus musculus


Alignment Length:879 Identity:534/879 - (60%)
Similarity:680/879 - (77%) Gaps:32/879 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSSPARSPSVGGATPKQGARTPTRGIASQDVETPMRMGPGRAVRPSDNIS---LP-PTSPG-NIS 60
            |||||.:||  ..:.::|..|||:.:.|::    .|..|.|..|..|:.:   || ||||| ::.
Mouse     1 MSSPASTPS--RRSSRRGRVTPTQSLRSEE----SRSSPNRRRRGEDSSTGELLPMPTSPGADLQ 59

  Fly    61 LP-------ATSPARGLGANMSEIDLSSPLNYGTPSSMGSIRTPRSGIRGTPLRARPDIRTDKRI 118
            .|       ::.|.....|...:.|:||||.||||||... .|||||:||||:|.|||:.:.::.
Mouse    60 SPPAQNALFSSPPQMHSLAIPLDFDVSSPLTYGTPSSRVE-GTPRSGVRGTPVRQRPDLGSARKG 123

  Fly   119 RQVAIGGGSGLEPIPEKGSETTDPV-SESSQAPQLVVWGTNVVVSQCKSKFKSFIMRFIDPSAEQ 182
            .||         .:...|:...|.| ||.|...:||:|||:|.|:.||..|:.|:..|.||.|::
Mouse   124 LQV---------DLQSDGAAAEDIVPSEQSLGQKLVIWGTDVNVATCKENFQRFLQCFTDPLAKE 179

  Fly   183 DEISENIDVNQPLYLQKLEEIHTLEEPYLNLNCAHLKTFDQDLYRQLICYPQEVIPGFDMAINEM 247
            :| :..||:.||||:|:|.||:...||:||:||.|:|:|.::||||||.|||||||.||||:||:
Mouse   180 EE-NVGIDITQPLYMQQLGEINITGEPFLNVNCEHIKSFSKNLYRQLISYPQEVIPTFDMAVNEI 243

  Fly   248 FFERYPAALLEHQIQVRPFNADKTRNMRSLNPEDMDQLISISGMVIRSSNVIPEMREAFFSCNIC 312
            ||:|||.::||||||||||||.||::||:|||||:||||:|||||||:|.:||||:||||.|.:|
Mouse   244 FFDRYPDSILEHQIQVRPFNALKTKSMRNLNPEDIDQLITISGMVIRTSQLIPEMQEAFFQCQVC 308

  Fly   313 SFSTTVEVDRGRINQPTLCTNCNTNHCFRLIHNRSEFTDKQLVKLQESPDDMAAGQTPHNVLLYA 377
            :.:|.||:|||||.:|..|.:|:|.|...||||||.|:|||::||||||:||.||||||.::|:|
Mouse   309 AHTTRVEIDRGRIAEPCSCVHCHTTHSMALIHNRSFFSDKQMIKLQESPEDMPAGQTPHTIVLFA 373

  Fly   378 HNDLVDKVQPGDRVTVTGIYRATPLKTGGLSSSVKSVYKTHVDVVHFRKVDNKRLYE-DEEGKDH 441
            ||||||||||||||.|||||||.|::.....|:||||||||:||:|:||.|.|||:. |||.:..
Mouse   374 HNDLVDKVQPGDRVNVTGIYRAVPIRVNPRVSNVKSVYKTHIDVIHYRKTDAKRLHGLDEEAEQK 438

  Fly   442 IFPPERVELLQLLAKKPDIYDRLARAIAPSIYENDDIKKGILLQLFGGTKKKHATLGRQNFRSEI 506
            :|..:||:||:.|::|||||:|||.|:||||||::||||||||||||||:|..:..||..||:||
Mouse   439 LFSEKRVKLLKELSRKPDIYERLASALAPSIYEHEDIKKGILLQLFGGTRKDFSHTGRGKFRAEI 503

  Fly   507 HLLLCGDPGTSKSQMLQYVFNLVPRSQYTSGRGSSAVGLTAYVTKDPETRQLVLQTGALVLADNG 571
            ::||||||||||||:||||:|||||.|||||:|||||||||||.|||||||||||||||||:|||
Mouse   504 NILLCGDPGTSKSQLLQYVYNLVPRGQYTSGKGSSAVGLTAYVMKDPETRQLVLQTGALVLSDNG 568

  Fly   572 VCCIDEFDKMNDSTRSVLHEVMEQQTLSIAKAGIICQLNARTSILAAANPAESQWNKRKNIIDNV 636
            :||||||||||:|||||||||||||||||||||||||||||||:||||||.|||||.:|..|:|:
Mouse   569 ICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENI 633

  Fly   637 QLPHTLLSRFDLIFLVLDPQDEIFDKRLASHLVSLYYVTRHEEEDTMFDMSVLRDYIAYAREHLS 701
            |||||||||||||||:||||||.:|:|||.|||||||.:..:.|:...||:||:||||||...:.
Mouse   634 QLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAYAHSTIM 698

  Fly   702 PTLSDEAQQRLIQAYVDMRKVGAGRGQISAYPRQLESLIRLSEAHAKVRLSNQVELLDVEEAWRL 766
            |.||:||.|.||:|||:|||:|:.||.:|||||||||||||:|||||||.||:||.:|||||.||
Mouse   699 PRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLIRLAEAHAKVRFSNKVEAIDVEEAKRL 763

  Fly   767 HREALKQSATDPLSGKIDVGILTTGLSTAARKKRADLVAAIKENLKKKGKVLTVPYQKLFSDIKE 831
            ||||||||||||.:|.:|:.|||||:|..:||::.:|..|:::.:..|||...:.||:||.||:.
Mouse   764 HREALKQSATDPRTGIVDISILTTGMSATSRKRKEELAEALRKLILSKGKTPALKYQQLFEDIRG 828

  Fly   832 GSQIMITREQFEDALKEVQDEGAIVVMGKNTIRI 865
            .|...||::.||:||:.:.|:..:.|.|| |:|:
Mouse   829 QSDTAITKDMFEEALRALADDDFLTVTGK-TVRL 861

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpaNP_477185.1 PHA03307 2..>150 CDD:223039 58/160 (36%)
MCM_N 165..267 CDD:464206 60/101 (59%)
MCM 270..772 CDD:214631 362/502 (72%)
Mcm4NP_032591.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..71 25/75 (33%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 90..121 19/31 (61%)
MCM_N 162..263 CDD:464206 60/101 (59%)
MCM 266..769 CDD:214631 362/502 (72%)
Arginine finger 641..644 2/2 (100%)

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