DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dpa and Mcm2

DIOPT Version :10

Sequence 1:NP_477185.1 Gene:dpa / 35679 FlyBaseID:FBgn0015929 Length:866 Species:Drosophila melanogaster
Sequence 2:NP_032590.2 Gene:Mcm2 / 17216 MGIID:105380 Length:904 Species:Mus musculus


Alignment Length:958 Identity:268/958 - (27%)
Similarity:436/958 - (45%) Gaps:205/958 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 SPSVGGATPKQGARTPTRGIASQDVETPMRMGPGRAVRPSDNISLPPTSPGNISLPATSPARGLG 71
            |.|:..::|.:..|.         :..|:...|||:.|.:|.::   :|||....|....:.|| 
Mouse     5 SESLSASSPARQRRR---------ISDPLTSSPGRSSRRADALT---SSPGRDLPPFEDESEGL- 56

  Fly    72 ANMSEIDLSSPLNYGTPSSMGSIRTPRSGIRGTPLRARPDIRTDKRIRQVAIGGGSGLE----PI 132
                                       .|..| |:....|  .::.|       |.|:|    ||
Mouse    57 ---------------------------LGTEG-PMEEEED--GEELI-------GDGMERDYRPI 84

  Fly   133 PE------KGSETTDPVSESSQAPQL------------------------VVWGTNVVVSQCKSK 167
            ||      :|....|...|...|.|.                        :::.::....:..::
Mouse    85 PELDVYEAEGLALDDEDVEELTASQREAAERTMRQRDREAGRGLGRMRRGLLYDSSEEDEERPAR 149

  Fly   168 FKSFIMRFIDPSAEQDEISENIDVNQPLYLQKLEEIHTLEEPYL-------NLNCAHLKTFDQDL 225
            .:..:.|..:...|.:|:.|:|:..:.|....:.|..::..|.|       |....|:.:...::
Mouse   150 KRRHVERATEDGEEDEEMIESIENLEDLKGHSVREWVSMAGPRLEIHHRFKNFLRTHVDSHGHNV 214

  Fly   226 YRQ-------------------------LICY-----PQEVIPGFDMAINEMFFERYPA-ALLEH 259
            :::                         ::.|     |.|::..||.|..|:....||. ..:.:
Mouse   215 FKERISDMCKENRESLVVNYEDLAAREHVLAYFLPEAPAELLQIFDEAALEVVLAMYPKYDRITN 279

  Fly   260 QIQVRPFNADKTRNMRSLNPEDMDQLISISGMVIRSSNVIPEMREAFFSCNICSF-------STT 317
            .|.||..:......:|||....::|||..||:|...:.|:|::....::|:.|:|       |..
Mouse   280 HIHVRISH
LPLVEELRSLRQLHLNQLIRTSGVVTSCTGVLPQLSMVKYNCSKCNFVLGPFCQSQN 344

  Fly   318 VEVDRGRINQPTLCTNCNTNHCFRLIHNRSEFTDKQLVKLQESPDDMAAGQTPH--NVLLYAHND 380
            .||      :|..|..|.:...|.:....:.:.:.|.:::||||..:|||:.|.  :.:|.|  |
Mouse   345 QEV------KPGSCPECQSAGPFEINMEETIYQNYQRIRIQESPGKVAAGRLPRSKDAILLA--D 401

  Fly   381 LVDKVQPGDRVTVTGIYRATPLKTGGLSSSVK-SVYKTHVDVVHFRKVDNKRLYEDEEGKDHIFP 444
            |||..:|||.:.:||||...  ..|.|:::.. .|:.|.:...|..|.|||....:...:|    
Mouse   402 LVDSCKPGDEIELTGIYHNN--YDGSLNTANGFPVFATIILANHVAKKDNKVAVGELTDED---- 460

  Fly   445 PERVELLQLLAKKPDIYDRLARAIAPSIYENDDIKKGILLQLFGGTKKKHATLGRQNFRSEIHLL 509
               |:::..|:|...|.:::..:||||||.::|||:|:.|.||||..|...  |:...|.:|::|
Mouse   461 ---VKMITGLSKDQQIGEKIFASIAPSIYGHEDIKRGLALALFGGEPKNPG--GKHKVRGDINVL 520

  Fly   510 LCGDPGTSKSQMLQYVFNLVPRSQYTSGRGSSAVGLTAYVTKDPETRQLVLQTGALVLADNGVCC 574
            |||||||:|||.|:|:..:..|:.:|:|:|:|||||||||.:.|.:|:..|:.|||||||.|||.
Mouse   521 LCGDPGTAKSQFLKYIEKVSSRAIFTTGQGASAVGLTAYVQRHPVSREWTLEAGALVLADRGVCL 585

  Fly   575 IDEFDKMNDSTRSVLHEVMEQQTLSIAKAGIICQLNARTSILAAANPAESQWNKRKNIIDNVQLP 639
            |||||||||..|:.:||.||||::||:||||:..|.||.:::|||||...:::......:||.|.
Mouse   586 IDEFDKMNDQDRTSIHEAMEQQSISISKAGIVTSLQARCTVIAAANPIGGRYDPSLTFSENVDLT 650

  Fly   640 HTLLSRFDLIFLVLDPQDEIFDKRLASHLVSLYYVTRHEE--------------EDTM------- 683
            ..::||||::.:|.|..|.:.|:.||..:|..:  .||..              |..|       
Mouse   651 EPIISRFDVLCVVRDTVDPVQDEMLARFVVGSH--VRHHPSNKKDEGLTNGGTLEPAMPNTYGVE 713

  Fly   684 -FDMSVLRDYIAYAREHLSPTLSDEAQQRLIQAYVDMRKVGAGRGQISAYPRQLESLIRLSEAHA 747
             ....||:.||.||:|.:.|.|:...|.::.:.|.|:||.....|.|....|.:||:||::||||
Mouse   714 PLPQEVLKKYIIYAKERVRPKLNQMDQDKVARMYSDLRKESMATGSIPITVRHIESMIRMAEAHA 778

  Fly   748 KVRLSNQVELLDVEEAWRLHREALKQSATDPLSGKIDV---GILTTGLSTAA-----RKKRADLV 804
            ::.|.:.|...||..|.|:..|:.           ||.   .::.:...|.|     |:...||:
Mouse   779 RMHLRDYVMEDDVNMAIRVMMESF-----------IDTQKFSVMRSMRKTFARYLSFRRDNNDLL 832

  Fly   805 AAIKENLKKKGKVLTVPYQKLFSDIKEGSQ---IMITREQFEDALKEV 849
            ..|.:.|..:    .|.||:    .:.|:|   |.|..:...|..:::
Mouse   833 LFILKQLVAE----QVTYQR----NRFGAQQDTIEIPEKDLMDKARQI 872

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpaNP_477185.1 PHA03307 2..>150 CDD:223039 31/152 (20%)
MCM_N 165..267 CDD:464206 23/139 (17%)
MCM 270..772 CDD:214631 195/533 (37%)
Mcm2NP_032590.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..166 35/210 (17%)
Interaction with KAT7. /evidence=ECO:0000269|PubMed:11278932 2..257 47/301 (16%)
Interaction with DNJC9. /evidence=ECO:0000250|UniProtKB:P49736 61..130 16/78 (21%)
MCM2_N 72..182 CDD:403724 19/116 (16%)
MCM_N 197..287 CDD:464206 14/89 (16%)
MCM 291..803 CDD:214631 195/543 (36%)
Arginine finger 655..658 2/2 (100%)

Return to query results.
Submit another query.