DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1620 and Mier1

DIOPT Version :9

Sequence 1:NP_001260777.1 Gene:CG1620 / 35678 FlyBaseID:FBgn0033183 Length:586 Species:Drosophila melanogaster
Sequence 2:XP_030109639.1 Gene:Mier1 / 71148 MGIID:1918398 Length:626 Species:Mus musculus


Alignment Length:582 Identity:171/582 - (29%)
Similarity:257/582 - (44%) Gaps:150/582 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 NSDLAVTPTKRERRKSPATSSDNNSTSVQPPMSPSSSVADTTFEPTIDMMVNDFDDEATLNEEEA 91
            |:.|.:...:|:.....|||.|:.                  |:|:.||:|:|||||.||.|||.
Mouse   113 NTSLLIANVRRKVSGGSATSEDHE------------------FDPSADMLVHDFDDERTLEEEEM 159

  Fly    92 LADMEAHSAEDEIATLREESEMPIEELLAKYGGTAASPAMSSSNRSGSSSRRARRATKRQYQELD 156
            :......|:  ||..|..|.:|||.|||:.||                                 
Mouse   160 MEGETNFSS--EIEDLAREGDMPIHELLSLYG--------------------------------- 189

  Fly   157 TEMAHTSTSTSSSTSQLEKHDGIDQEEEPKEEADKLASPPESGEASSVDTEDAQKYEGIKKQHRS 221
                      ..||.:|.:.:..::|||..|:.:...:...||.:.....|:.:...|.:.:.:|
Mouse   190 ----------YDSTVRLPEEEEEEEEEEEGEDDEDADNDDNSGCSGENKEENIKDSSGQEDETQS 244

  Fly   222 HLLDLYPDESFVDLAPTCGEETERFTPLQTLFDEVEAEEEEESESELD-----DARKIIMVGHDY 281
            ...|  |.:|.     |..:..|...|.:..:.:..:|.|||||.:.|     |.:|.||||..:
Mouse   245 SNDD--PSQSV-----TSQDAQEIIRPRRCKYFDTNSEIEEESEEDEDYIPSEDWKKEIMVGSMF 302

  Fly   282 QAEIPEGLSQYGD-ILPYENEDQLIWEPSQVSEREVEEYLAKIQETRSIVPPDDGSETTAGEEGA 345
            |||||.|:.:|.: ...|||:|||:|:|..:.|.:|..:|            .|.|..|..|:| 
Mouse   303 QAEIPVGVCRYKENEKVYENDDQLLWDPECLPEEKVVVFL------------KDASRRTGDEKG- 354

  Fly   346 ATGATIEPPAPITAPATPPRAPLATSGAGDQELVVKDNEQALHLLVQCGYDFKEALRRKRMNVLP 410
                         ..|.|..:.            :|||||||:.||:|.:|.:|||||.|.||..
Mouse   355 -------------VEAIPEGSH------------IKDNEQALYELVKCSFDTEEALRRLRFNVKA 394

  Fly   411 LTDTMSSWSEDECLKFEEGIQRFGKDFYQIRQNQVRTRTMRELVHFYYLWKKSERRD-------- 467
            ..:.:|.|:|:||..||:|::.:||||:.|:.|:||||::.|.|.|||:||||||.|        
Mouse   395 AREELSVWTEEECRNFEQGLKAYGKDFHLIQANKVRTRSVGECVAFYYMWKKSERYDFFAQQTRF 459

  Fly   468 --QSFALNDTI-DHMDVFINEAGGGNGSGNGNGAGIVSGTANS-----NGSCSPHSSNG-HSNGD 523
              :.:.|:..: |:||..::|:.....|...:.....|.::||     :|:.|..:.|| .|||.
Mouse   460 GKKKYNLHPGVTDYMDRLLDESESAASSRAPSPPPTASNSSNSQSEKEDGAVSSRNQNGVSSNGP 524

  Fly   524 LSALEKDTIASPRKPASKSYSIMTGSQAVGNPSGGNRKRCSSASLPLEDEDNNVEEEPSLST 585
            ...|.|:             .:......|..|:|||:|..      |.|.|.|..|..:|:|
Mouse   525 GEILNKE-------------EVKVEGLHVNGPTGGNKKPL------LTDMDTNGYEANNLTT 567

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1620NP_001260777.1 ELM2 275..320 CDD:279754 21/45 (47%)
SANT 417..463 CDD:197842 24/45 (53%)
SANT_MTA3_like 417..462 CDD:212559 23/44 (52%)
Mier1XP_030109639.1 ELM2 296..346 CDD:366648 23/61 (38%)
SANT_MTA3_like 402..446 CDD:212559 23/43 (53%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167838072
Domainoid 1 1.000 70 1.000 Domainoid score I9511
eggNOG 1 0.900 - - E1_KOG1194
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 198 1.000 Inparanoid score I3789
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001261
OrthoInspector 1 1.000 - - otm42538
orthoMCL 1 0.900 - - OOG6_107398
Panther 1 1.100 - - LDO PTHR10865
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3763
SonicParanoid 1 1.000 - - X1119
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1211.780

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