DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1620 and Mier2

DIOPT Version :9

Sequence 1:NP_001260777.1 Gene:CG1620 / 35678 FlyBaseID:FBgn0033183 Length:586 Species:Drosophila melanogaster
Sequence 2:XP_006514144.1 Gene:Mier2 / 70427 MGIID:1917677 Length:563 Species:Mus musculus


Alignment Length:594 Identity:161/594 - (27%)
Similarity:244/594 - (41%) Gaps:160/594 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 RKSPATSS------DNNSTSVQPPMSPSSSVADTTFEPTIDMMVNDFDDEATLNEEEALADMEAH 98
            |:||..:|      .....|:|.....|...||..|. ..:::..:::    |.|..|.|.....
Mouse    22 RQSPRVASCLVHSLCPREPSLQTTAVVSMGSADHQFN-LAELLTQNYN----LQEGCAEAPQCPD 81

  Fly    99 SAEDEIAT--LREESEMPIEELLAKYGGTAASPAMSSSNRSGSSSRRARRATKRQYQELDTEMAH 161
            ..|:|:..  :.:.|:||::||||.||..::.|.....:..|.::......|      ||.|   
Mouse    82 KPEEELDKDFIDQSSDMPLDELLALYGYESSDPISEQESEGGDTAPALPDMT------LDKE--- 137

  Fly   162 TSTSTSSSTSQLEKH--DGIDQEEEPKEEADKLASPPESGEASSVDTEDAQKYEGIKKQHRSHLL 224
                      |:.|.  .| ::|||.:..||.|.....|.|||                      
Mouse   138 ----------QIAKDLLSG-EEEEETQSSADDLTPSVTSHEAS---------------------- 169

  Fly   225 DLYPDESFVDLAPTCGEETERFTPLQTLFDEVEAEEEEESESELDDARKIIMVGHDYQAEIP-EG 288
            ||:.::|           ..||...........:.:.||.....:..:|.||||..:||::. ..
Mouse   170 DLFHNQS-----------GSRFLAGDNGPGSSASSDTEEDALPANKCKKEIMVGPQFQADLNILH 223

  Fly   289 LSQYGDILPYENEDQLIWEPSQVSEREVEEYLAKIQETRSIVPPDDGSETTAGEEGAATGATIEP 353
            |:::.|.: |||||||:|.||.:.||||||:|.:..:.|        .:..||            
Mouse   224 LNRHCDKI-YENEDQLLWSPSVLPEREVEEFLYRAVKRR--------WQEMAG------------ 267

  Fly   354 PAPITAPATPPRAPLATSGAGDQELVVKDNEQALHLLVQCGYDFKEALRRKRMNVLPLTDTMSSW 418
                      |:.|     .|:   ||||:||||:.||:|.::.:|||||.|.||..:.|.:.:|
Mouse   268 ----------PQIP-----EGE---VVKDSEQALYELVKCNFNVEEALRRLRFNVKVIRDGLCAW 314

  Fly   419 SEDECLKFEEGIQRFGKDFYQIRQNQVRTRTMRELVHFYYLWKKSERRDQ-------------SF 470
            ||:||..||.|.:..||:|:.|:.|:||||::.|.|.:|||||||||.|.             |.
Mouse   315 SEEECRNFEHGFRVHGKNFHLIQANKVRTRSVGECVEYYYLWKKSERYDYFAQQTRLGRRKFVSS 379

  Fly   471 ALNDTIDHMDVFINEAGGGNGSGNG---NGAGIVSGTANSNGSCSPHSSN---------GHSNGD 523
            ...||...:|       |.:..|:.   :.||:..|.:...|:..|.:.:         |..:.|
Mouse   380 GTTDTEQDLD-------GLDPDGHARLHSEAGVPVGESTREGTVEPLNVDIEAGGLDQPGVGSDD 437

  Fly   524 LSAL-----------EKDTIASPRKPASKSYSIMTGSQAVGNPSGGNRKRCS-SASLPLEDEDNN 576
            |.:.           |...:.|.::|.|.:.|......|...|..|...|.. ..:||       
Mouse   438 LPSSEPGPRPFQQLDEPPAVPSLQQPTSLAASAELPPAAAAAPEPGTSPRLPVDLALP------- 495

  Fly   577 VEEEPSLST 585
             ||.|.:|:
Mouse   496 -EELPLVSS 503

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1620NP_001260777.1 ELM2 275..320 CDD:279754 24/45 (53%)
SANT 417..463 CDD:197842 24/45 (53%)
SANT_MTA3_like 417..462 CDD:212559 23/44 (52%)
Mier2XP_006514144.1 ELM2 209..259 CDD:366648 25/50 (50%)
SANT_MTA3_like 314..358 CDD:212559 23/43 (53%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167838071
Domainoid 1 1.000 70 1.000 Domainoid score I9511
eggNOG 1 0.900 - - E1_KOG1194
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 198 1.000 Inparanoid score I3789
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1062529at2759
OrthoFinder 1 1.000 - - FOG0001261
OrthoInspector 1 1.000 - - otm42538
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10865
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1119
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1110.860

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