DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1620 and mideasa

DIOPT Version :9

Sequence 1:NP_001260777.1 Gene:CG1620 / 35678 FlyBaseID:FBgn0033183 Length:586 Species:Drosophila melanogaster
Sequence 2:XP_005160646.1 Gene:mideasa / 569908 ZFINID:ZDB-GENE-041001-151 Length:1016 Species:Danio rerio


Alignment Length:695 Identity:145/695 - (20%)
Similarity:237/695 - (34%) Gaps:243/695 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 SQHSASEAS--ADSGSLANSDLAVTPTKRERRKSPATSS--DNNSTSVQPPMSPSSSVA------ 65
            |||..|:.|  .:||:.|.:...:...:.:|:..|..|.  ..:..|.|...:|...|:      
Zfish   346 SQHPVSQGSNFQESGNPAEASPEIQEDQGKRQVFPRRSRRLSRDGVSPQSSQTPKDKVSAQNGGD 410

  Fly    66 DTTFEPTIDMMVNDFDDEATLNEEEALADMEAHSAEDEIATLREE-SEMPIEELLAKYGG-TAAS 128
            |....||:.::      ::|.....|       |.|..:.||.:: |||  |.|.||... ....
Zfish   411 DGVQAPTVGVI------QSTQRRRRA-------SKEINLETLAQQASEM--EFLPAKREDVNPGR 460

  Fly   129 PA--------MSSSNRSGSSSRRARRATKRQYQELDTEMAHTSTST-----------------SS 168
            ||        :|...|.|    :.:......:.:|| .:.|||.|:                 :|
Zfish   461 PAGMVPLVIPVSVPVRKG----QTQMEVPGNWPQLD-NVRHTSGSSQPDRKPSVIVARRQSLKNS 520

  Fly   169 STSQLEKHDGIDQEEEPKEEADKLASP-PESGEASSVDTEDAQKYEGIKKQHRSHL---LDLYPD 229
            ::....:..|.|.:.:.:...:.|..| |.:..|.|:       |..| ..::|:|   |.| ||
Zfish   521 ASENFIQGKGQDDKSKRRPRPEPLVIPQPCTFIAPSI-------YSSI-SAYQSNLRSPLRL-PD 576

  Fly   230 ESFVDLAPTCGEETERFTP--------------LQTLFDEVEAEEE----------------EES 264
            .:.: :.|        :||              ..|:...:.|..:                ..|
Zfish   577 HAIM-IPP--------YTPPPILSPVREGSGLYFSTVLSSMAAGSQVLPPPPTPRSASRSLLRSS 632

  Fly   265 ESE--------LDDARKI-----IMVGHDYQAEIPEGLSQYGDILPYENEDQLIWEPSQVSEREV 316
            .|:        :.:|..:     |.:|..|||||||.|.: ...|..:::..|:|:|...:.:| 
Zfish   633 SSDITPPAPPLIGEATPVSLEPHINIGSKYQAEIPELLDR-SSALKDQHKATLVWQPESSASQE- 695

  Fly   317 EEYLAKIQETRSIVPPDDGSETTAGEEGAATGATIEPPAPITAPATPPRAPLATSGAGDQELVVK 381
                .::....::|    .|....|      |.|                               
Zfish   696 ----TRVDNLMNLV----CSSVMYG------GGT------------------------------- 715

  Fly   382 DNEQALHLLVQCGYDFKEALRRKRMNVLPLTDTMSS---------------WSEDECLKFEEGIQ 431
            :.|.|:|.|.:|..|..|||     .::.|.:.:.|               ||.||...|.:||.
Zfish   716 NTELAMHCLHECKGDVMEAL-----EMMMLKNPIFSWNHQLANYHYAGSDYWSADEKRYFNKGIS 775

  Fly   432 RFGKDFYQIRQNQVRTRTMRELVHFYYLWKKSER-----------------------------RD 467
            .:.|||:.: |..|||:|:.:.|.|||.:||..|                             .|
Zfish   776 AYTKDFFMV-QKLVRTKTVAQCVEFYYTYKKQARVTRNGTCTYGPSDPEESIPVMNARQADKEND 839

  Fly   468 --QSFALNDTIDH--MDVFINEAGGGNGSGNGNGAGIVSGTANSNGSCSPHSSNGHSNGDLSALE 528
              |...:.|::|.  .||........|...:      ::.......|.:...|:|     |..:.
Zfish   840 CKQQEEMEDSVDERLQDVTKTLQQSDNERAD------MAQEDQKKSSVAAEESSG-----LMVVV 893

  Fly   529 KDTI--ASPRKPASKSYSI------MTGSQAVGNPSG-GNRKRCS 564
            :.|.  .||..|..:||:|      .|.|:..|.|.| ...|:||
Zfish   894 QPTFKTPSPAPPKPRSYNIGRKTKPSTVSKPQGEPEGIFPCKKCS 938

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1620NP_001260777.1 ELM2 275..320 CDD:279754 15/44 (34%)
SANT 417..463 CDD:197842 21/60 (35%)
SANT_MTA3_like 417..462 CDD:212559 20/59 (34%)
mideasaXP_005160646.1 ELM2 656..707 CDD:279754 16/60 (27%)
SANT 760..805 CDD:197842 19/45 (42%)
SANT 762..805 CDD:304392 19/43 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1194
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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