DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1620 and mier3b

DIOPT Version :9

Sequence 1:NP_001260777.1 Gene:CG1620 / 35678 FlyBaseID:FBgn0033183 Length:586 Species:Drosophila melanogaster
Sequence 2:XP_005166936.1 Gene:mier3b / 567247 ZFINID:ZDB-GENE-070424-65 Length:538 Species:Danio rerio


Alignment Length:516 Identity:163/516 - (31%)
Similarity:222/516 - (43%) Gaps:144/516 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 SPSSSVA--DTTFEPTIDMMVNDFDDEATLNEEEALADMEAHSAEDEIATLREESEMPIEELLAK 121
            ||..|::  |..|:||.:|:::::|||.||.|||.|......||  |::.|..|..|||:||||.
Zfish    10 SPVGSLSSEDHDFDPTAEMLIHEYDDERTLEEEELLEGERNFSA--ELSDLEREGNMPIDELLAM 72

  Fly   122 YGGTAASPAMSSSNRSGSSSRRARRATKRQYQELDTEMAHTSTSTSSS--TSQLEKHDGIDQEEE 184
            |                            :|:      |..||...||  :|.:|..|.:.....
Zfish    73 Y----------------------------RYE------ASVSTGAGSSIDSSSVELADDLPDMTL 103

  Fly   185 PKEE--ADKLASPPESGEASSVDTEDAQKYEGIKKQHRSHLLDLYPDESFVDLAP--TCGEETER 245
            .|||  .|.|:...|....||.|                            ||.|  |..|.|:.
Zfish   104 DKEEIAKDLLSGDYEEETQSSAD----------------------------DLTPSVTSHEATDF 140

  Fly   246 FTPLQTLFDEVEAEEEEESESELD-----DARKIIMVGHDYQAEIPEGLSQYG-DILPYENEDQL 304
            |.  :||...|..:.::|||.|.|     |:||.||||..||||:|.|||.|. |...||.||||
Zfish   141 FP--RTLRSNVTYDGDKESEGEEDGVNSEDSRKEIMVGSQYQAEVPAGLSHYNDDEKVYEEEDQL 203

  Fly   305 IWEPSQVSEREVEEYL--AKIQETRSIVPPDDGSETTAGEEGAATGATIEPPAPITAPATPPRAP 367
            :|.|.::||.:|::||  |..|.|      ||.:..:..|.                        
Zfish   204 LWCPDELSEYKVKDYLREALSQST------DDRTHYSTSEH------------------------ 238

  Fly   368 LATSGAGDQELVVKDNEQALHLLVQCGYDFKEALRRKRMNVLPLTDTMSSWSEDECLKFEEGIQR 432
                        ::||||||..|::|.||.:|||.|...||....:....|||:||..||..:|.
Zfish   239 ------------IRDNEQALFELLKCNYDTREALVRYCSNVKTSKEESPPWSEEECRNFEHALQI 291

  Fly   433 FGKDFYQIRQNQVRTRTMRELVHFYYLWKKSERRDQSFALND------------TIDHMDVFINE 485
            :.|:|:.|::::|:|||:.|.|.|||:||||||.|. ||..:            ..|.||..::|
Zfish   292 YEKNFHLIQKHKVQTRTVAECVAFYYMWKKSERFDY-FAQQNRFGKKKYSCYPGVTDLMDRLVDE 355

  Fly   486 AGG----GNGSGNGNGAGIVSGTANSNGSCSPHSSNGHSNGDLSALEKDTIASPRKPASKS 542
            |.|    |:......|||   |...::........|..:..||:||..........||..|
Zfish   356 AEGLAVDGSSPVCSAGAG---GRLEASAEQQLGLLNSITASDLTALSNSVANVCNGPAEMS 413

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1620NP_001260777.1 ELM2 275..320 CDD:279754 25/45 (56%)
SANT 417..463 CDD:197842 22/45 (49%)
SANT_MTA3_like 417..462 CDD:212559 21/44 (48%)
mier3bXP_005166936.1 ELM2 173..224 CDD:279754 28/50 (56%)
SANT 282..321 CDD:304392 17/38 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170581878
Domainoid 1 1.000 100 1.000 Domainoid score I6968
eggNOG 1 0.900 - - E1_KOG1194
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 191 1.000 Inparanoid score I3854
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1062529at2759
OrthoFinder 1 1.000 - - FOG0001261
OrthoInspector 1 1.000 - - otm25086
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10865
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1119
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1211.860

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