DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1620 and mier1b

DIOPT Version :10

Sequence 1:NP_610287.2 Gene:CG1620 / 35678 FlyBaseID:FBgn0033183 Length:586 Species:Drosophila melanogaster
Sequence 2:NP_001278272.1 Gene:mier1b / 566167 ZFINID:ZDB-GENE-070705-170 Length:494 Species:Danio rerio


Alignment Length:576 Identity:167/576 - (28%)
Similarity:250/576 - (43%) Gaps:152/576 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    70 EPTI-----DMMVNDFDDEATLNEEEALADMEAHSAEDEIATLREESEMPIEELLAKYG-GTAAS 128
            ||::     :|::.|:||:.| .|:|.:.:.:|:..: ||..|.:|.||||:|||:.|| |.:.|
Zfish     3 EPSLGSSSPEMLLPDYDDDQT-PEDEEVPEGDANFGK-EIEELAKEGEMPIQELLSLYGYGGSGS 65

  Fly   129 PAMSSSNRSGSSSRRARRATKRQYQELDTEMAHTSTSTSSSTSQLEKHDGIDQEEEPKEEADKLA 193
            |                        :.|.|            .:.|..||.::|||.:||     
Zfish    66 P------------------------DEDEE------------DEDEDEDGDEEEEEEEEE----- 89

  Fly   194 SPPESGEASSVDTEDAQKYEG-IKKQH------------RSHLLDLYPDESFVDLAPTCGEETER 245
              .|..||..:|.:|:.:..| :||:.            .||..|     |.......|.:....
Zfish    90 --EEEDEAEDMDNDDSSRSTGDLKKRQEDGAKVSTGIVKESHSTD-----SRACAVKACNKAELI 147

  Fly   246 FTPLQTLFDEVEAEEEEESESEL---DDARKIIMVGHDYQAEIPEGLSQYGD-ILPYENEDQLIW 306
            .|.....|...|.:||.|.:.:.   :|.:|.||||..||||.|.||.:|.: ...|||:|||:|
Zfish   148 RTKNHGYFQNNEVDEESEEDDDYIPSEDWKKEIMVGSMYQAETPSGLCKYKENEKVYENDDQLLW 212

  Fly   307 EPSQVSEREVEEYLAKIQETRSIVPPDDGSETTAGEEGAATGATIEPPAPITAPATPPRAPLATS 371
            .|..:.|..|.|:|.            |....| |||   ||....|                  
Zfish   213 NPQMLPENTVVEFLT------------DACRRT-GEE---TGVDAIP------------------ 243

  Fly   372 GAGDQELVVKDNEQALHLLVQCGYDFKEALRRKRMNVLPLTDTMSSWSEDECLKFEEGIQRFGKD 436
             .|..   :|||||||:.||:|.::..|||||.|.||....:.:|.|:|:||..||:|::.:|||
Zfish   244 -EGSH---IKDNEQALYELVKCNFETDEALRRLRFNVKAAREELSVWTEEECRNFEQGLKAYGKD 304

  Fly   437 FYQIRQNQVRTRTMRELVHFYYLWKKSERRD----------QSFALNDTI-DHMDVFINEAGGGN 490
            |:.|:.|:||||::.:.|.|||:||||||.|          :.:.|:..: |:||..::|.....
Zfish   305 FHFIQANKVRTRSVGDCVAFYYMWKKSERYDFFAQQTRLGKRKYNLHPGVTDYMDRLLDETESTA 369

  Fly   491 GSGNGNGAGIVSG-----------TANSNGSCSPHSSNGHSNGDLSA---LEKDTIASPRKPASK 541
            .|.........|.           |:..|| .|.|||:......||:   ::.:::.:...|...
Zfish   370 SSRAATPLPAASSSSTTSQSEREETSGHNG-LSSHSSSADGIQTLSSDNEVKIESVQANGAPKHL 433

  Fly   542 SYSIMTGSQAV-------GNPSGGNRKR--CSSASLPLE------DEDNNVEEEPS 582
            .::..|.|..|       .|.:|..:.:  |.|...|.:      |....||.:||
Zfish   434 LHTDHTDSNGVKLTEIHNTNRNGAVKHQLDCQSLERPAKKCRTESDSLAQVETDPS 489

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1620NP_610287.2 ELM2 275..325 CDD:460214 24/50 (48%)
SANT_MTA3_like 417..462 CDD:212559 22/44 (50%)
mier1bNP_001278272.1 ELM2 180..230 CDD:460214 25/61 (41%)
SANT_MTA3_like 286..330 CDD:212559 22/43 (51%)
MIER1_3_C 340..>377 CDD:437258 6/36 (17%)

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