DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1620 and mier1b

DIOPT Version :9

Sequence 1:NP_001260777.1 Gene:CG1620 / 35678 FlyBaseID:FBgn0033183 Length:586 Species:Drosophila melanogaster
Sequence 2:NP_001278272.1 Gene:mier1b / 566167 ZFINID:ZDB-GENE-070705-170 Length:494 Species:Danio rerio


Alignment Length:576 Identity:167/576 - (28%)
Similarity:250/576 - (43%) Gaps:152/576 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    70 EPTI-----DMMVNDFDDEATLNEEEALADMEAHSAEDEIATLREESEMPIEELLAKYG-GTAAS 128
            ||::     :|::.|:||:.| .|:|.:.:.:|:..: ||..|.:|.||||:|||:.|| |.:.|
Zfish     3 EPSLGSSSPEMLLPDYDDDQT-PEDEEVPEGDANFGK-EIEELAKEGEMPIQELLSLYGYGGSGS 65

  Fly   129 PAMSSSNRSGSSSRRARRATKRQYQELDTEMAHTSTSTSSSTSQLEKHDGIDQEEEPKEEADKLA 193
            |                        :.|.|            .:.|..||.::|||.:||     
Zfish    66 P------------------------DEDEE------------DEDEDEDGDEEEEEEEEE----- 89

  Fly   194 SPPESGEASSVDTEDAQKYEG-IKKQH------------RSHLLDLYPDESFVDLAPTCGEETER 245
              .|..||..:|.:|:.:..| :||:.            .||..|     |.......|.:....
Zfish    90 --EEEDEAEDMDNDDSSRSTGDLKKRQEDGAKVSTGIVKESHSTD-----SRACAVKACNKAELI 147

  Fly   246 FTPLQTLFDEVEAEEEEESESEL---DDARKIIMVGHDYQAEIPEGLSQYGD-ILPYENEDQLIW 306
            .|.....|...|.:||.|.:.:.   :|.:|.||||..||||.|.||.:|.: ...|||:|||:|
Zfish   148 RTKNHGYFQNNEVDEESEEDDDYIPSEDWKKEIMVGSMYQAETPSGLCKYKENEKVYENDDQLLW 212

  Fly   307 EPSQVSEREVEEYLAKIQETRSIVPPDDGSETTAGEEGAATGATIEPPAPITAPATPPRAPLATS 371
            .|..:.|..|.|:|.            |....| |||   ||....|                  
Zfish   213 NPQMLPENTVVEFLT------------DACRRT-GEE---TGVDAIP------------------ 243

  Fly   372 GAGDQELVVKDNEQALHLLVQCGYDFKEALRRKRMNVLPLTDTMSSWSEDECLKFEEGIQRFGKD 436
             .|..   :|||||||:.||:|.::..|||||.|.||....:.:|.|:|:||..||:|::.:|||
Zfish   244 -EGSH---IKDNEQALYELVKCNFETDEALRRLRFNVKAAREELSVWTEEECRNFEQGLKAYGKD 304

  Fly   437 FYQIRQNQVRTRTMRELVHFYYLWKKSERRD----------QSFALNDTI-DHMDVFINEAGGGN 490
            |:.|:.|:||||::.:.|.|||:||||||.|          :.:.|:..: |:||..::|.....
Zfish   305 FHFIQANKVRTRSVGDCVAFYYMWKKSERYDFFAQQTRLGKRKYNLHPGVTDYMDRLLDETESTA 369

  Fly   491 GSGNGNGAGIVSG-----------TANSNGSCSPHSSNGHSNGDLSA---LEKDTIASPRKPASK 541
            .|.........|.           |:..|| .|.|||:......||:   ::.:::.:...|...
Zfish   370 SSRAATPLPAASSSSTTSQSEREETSGHNG-LSSHSSSADGIQTLSSDNEVKIESVQANGAPKHL 433

  Fly   542 SYSIMTGSQAV-------GNPSGGNRKR--CSSASLPLE------DEDNNVEEEPS 582
            .::..|.|..|       .|.:|..:.:  |.|...|.:      |....||.:||
Zfish   434 LHTDHTDSNGVKLTEIHNTNRNGAVKHQLDCQSLERPAKKCRTESDSLAQVETDPS 489

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1620NP_001260777.1 ELM2 275..320 CDD:279754 23/45 (51%)
SANT 417..463 CDD:197842 23/45 (51%)
SANT_MTA3_like 417..462 CDD:212559 22/44 (50%)
mier1bNP_001278272.1 ELM2 180..230 CDD:279754 25/61 (41%)
SANT 286..331 CDD:197842 23/44 (52%)
SANT_MTA3_like 286..330 CDD:212559 22/43 (51%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170581880
Domainoid 1 1.000 62 1.000 Domainoid score I10305
eggNOG 1 0.900 - - E1_KOG1194
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 191 1.000 Inparanoid score I3854
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1062529at2759
OrthoFinder 1 1.000 - - FOG0001261
OrthoInspector 1 1.000 - - otm25086
orthoMCL 1 0.900 - - OOG6_107398
Panther 1 1.100 - - LDO PTHR10865
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3763
SonicParanoid 1 1.000 - - X1119
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1312.790

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