DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1620 and mier3a

DIOPT Version :9

Sequence 1:NP_001260777.1 Gene:CG1620 / 35678 FlyBaseID:FBgn0033183 Length:586 Species:Drosophila melanogaster
Sequence 2:NP_001025320.2 Gene:mier3a / 560884 ZFINID:ZDB-GENE-050913-97 Length:531 Species:Danio rerio


Alignment Length:527 Identity:168/527 - (31%)
Similarity:231/527 - (43%) Gaps:156/527 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 SVQPPMSPSSSVADTTFEPTIDMMVNDFDDEATLNEEEALADMEAHSAEDEIATLREESEMPIEE 117
            |..|..|.||.  |..|:||.||:|:|:|||.||.||| :.:.|::.: .|||.|.:|..||:||
Zfish     8 STSPVDSLSSE--DHDFDPTADMLVHDYDDERTLEEEE-MREGESNGS-SEIADLEKEGNMPLEE 68

  Fly   118 LLAKYGGTAASPAMSSSNRSGSSSRRARRATKRQYQELDTEMAHTSTSTSSSTSQLEKHDGIDQE 182
            |||.|                            :|:..|:.:..:||.:||    :|..|.:...
Zfish    69 LLALY----------------------------RYEAGDSVIGGSSTDSSS----VELTDELPDM 101

  Fly   183 EEPKEEADKLASPPESGEASSVDTEDAQKYEGIKKQHRSHLLDLYPDESFVDLAPT-CGEETERF 246
            ...|||..|        :..|.|.|:.|                   .|..||.|: ...||..|
Zfish   102 TLDKEEIAK--------DLLSGDDEETQ-------------------SSADDLTPSVTSHETNDF 139

  Fly   247 TPLQTLFDEVEAEEEEESESELD-----DARKIIMVGHDYQAEIPEGLSQYGD-ILPYENEDQLI 305
            .| :||...|..:.::|||.|.|     |:||.||||.:|||||| .|:.|.| ...|..||||:
Zfish   140 FP-RTLRSNVVYDGDKESEGEEDGLSPEDSRKEIMVGSEYQAEIP-ALACYNDQEKVYAEEDQLL 202

  Fly   306 WEPSQVSEREVEEYLAKIQETRSIVPPDDGSETTAGEEGAATGATIEPPAPITAPATPPRAPLAT 370
            |:|..:.|.:|:.:|..                                            .|:.
Zfish   203 WQPDMLPESKVKSFLLD--------------------------------------------ALSA 223

  Fly   371 SGAGDQE---LVVKDNEQALHLLVQCGYDFKEALRRKRMNVLPLTDTMSSWSEDECLKFEEGIQR 432
            .|..|::   .:||||||||:.|::|.|:..|||.|.|.|.....|.|..|||:||..||..:..
Zfish   224 DGKMDRDGRCSLVKDNEQALYELLKCNYNVPEALERYRSNDKSSKDEMLPWSEEECRNFEHALLL 288

  Fly   433 FGKDFYQIRQNQVRTRTMRELVHFYYLWKKSERRDQSFALN-----------DTIDHMDVFINEA 486
            :.|:|:.|::::|.|||:.|.|.|||:||||||.|.....|           ...|.||..::||
Zfish   289 YEKNFHLIQKHKVSTRTVAECVAFYYMWKKSERFDFFVQQNRFGKKKFSSYPGVTDLMDRLVDEA 353

  Fly   487 GGGNGSGNGNGAGIVSGTA----NSNGSCSPHSS------NGHSNGDLSALEKDTIASPRKPAS- 540
                       .|:|.|:|    :|:|...|.:.      |..:..||||| ..|:||...||. 
Zfish   354 -----------EGLVDGSASVCSSSSGRIDPPTEQQLNILNSITASDLSAL-TSTVASVCNPADV 406

  Fly   541 ---KSYS 544
               .|||
Zfish   407 SCLDSYS 413

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1620NP_001260777.1 ELM2 275..320 CDD:279754 22/45 (49%)
SANT 417..463 CDD:197842 21/45 (47%)
SANT_MTA3_like 417..462 CDD:212559 20/44 (45%)
mier3aNP_001025320.2 ELM2 172..222 CDD:279754 23/94 (24%)
SANT 273..319 CDD:197842 21/45 (47%)
SANT_MTA3_like 274..318 CDD:212559 20/43 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170581876
Domainoid 1 1.000 100 1.000 Domainoid score I6968
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 191 1.000 Inparanoid score I3854
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1062529at2759
OrthoFinder 1 1.000 - - FOG0001261
OrthoInspector 1 1.000 - - otm25086
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10865
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3763
SonicParanoid 1 1.000 - - X1119
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1010.030

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