DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1620 and mier3

DIOPT Version :9

Sequence 1:NP_001260777.1 Gene:CG1620 / 35678 FlyBaseID:FBgn0033183 Length:586 Species:Drosophila melanogaster
Sequence 2:XP_012815836.1 Gene:mier3 / 493448 XenbaseID:XB-GENE-947088 Length:545 Species:Xenopus tropicalis


Alignment Length:552 Identity:155/552 - (28%)
Similarity:222/552 - (40%) Gaps:160/552 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 SPSSSVA--DTTFEPTIDMMVNDFDDEATLNEEEALADMEAHSAEDEIATLREESEMPIEELLAK 121
            ||..|::  |..|:||.:|:|:|:|||.||.||| :.:...|.| .||..|.:|..||:|:|||.
 Frog    10 SPVGSLSSEDHDFDPTAEMLVHDYDDERTLEEEE-MKEGGKHFA-SEIEDLEKEGNMPLEDLLAI 72

  Fly   122 YGGTAASPAMSSSNRSGSSSRRARRATKRQYQELDTEMAHTSTSTSSSTSQLEKHDGIDQEEEPK 186
            |......|..:.|:...|.|            ||..::...:.........|...|    :||.:
 Frog    73 YVYEDPDPVTAVSSAGSSPS------------ELADDLPDMTLDKEEIAKDLLSGD----DEETQ 121

  Fly   187 EEADKLASPPESGEASSVDTEDAQKYEGIKKQHRSHLLDLYPDESFVDLAPTCGEETERFTPLQ- 250
            ..||.|.....|.||.                      |.:|                  .||: 
 Frog   122 SSADDLTPSVTSHEAR----------------------DFFP------------------RPLRS 146

  Fly   251 -TLFDEVEAEEEEESESEL----DDARKIIMVGHDYQAEIPEGLSQYGDILP----YENEDQLIW 306
             |.:|..:..|.|:.|::.    :|.||.||:|..:|||||   ...|..||    ||:||.|:|
 Frog   147 NTTYDGDKESESEDLETDFGNSSEDLRKEIMLGPLHQAEIP---PFQGKCLPDCTDYEHEDHLLW 208

  Fly   307 EPSQVSEREVEEYLAKIQETRSIVPPDDGSETTAGEEGAATGATIEPPAPITAPATPPRAPLATS 371
            .|..:.|.:|:|||:.|              :.|..|..|.|                       
 Frog   209 RPDVLPENKVKEYLSDI--------------SRAANEKEAGG----------------------- 236

  Fly   372 GAGDQELVVKDNEQALHLLVQCGYDFKEALRRKRMNVLPLTDTMSSWSEDECLKFEEGIQRFGKD 436
                  ::::|||||||.|.:|.|:.||||.|...:.....|..:.|:|:||..||..:...|||
 Frog   237 ------VLLRDNEQALHELFKCQYNIKEALERYNSSRKAAQDETTLWTEEECSNFEHALMTHGKD 295

  Fly   437 FYQIRQNQVRTRTMRELVHFYYLWKKSERRDQSFALN------------DTIDHMDVFINEAGGG 489
            |:.|::|:|::||:.|.|.|||:||||||.|. ||..            ...|:||..::||...
 Frog   296 FHLIQKNEVKSRTVAECVAFYYMWKKSERYDY-FAQRTKFGKKRYNHHPGVTDYMDRLVDEAEVL 359

  Fly   490 NGSGNGNGAGIVSGTANSNGSCSPHSS----NGHSNGDLSALEKDTI------------------ 532
            ...||.:..     |.:|.....|.|.    |..:..||:||.....                  
 Frog   360 GAVGNSSAL-----TCHSRTDPLPDSQLNILNSITANDLTALTNSVATVCNSGEVNCLNEGFPVL 419

  Fly   533 -ASPRKPASKSYSIMTGSQAVGNPSGGNRKRC 563
             |.||.|.:   .:..|::.:....|.....|
 Frog   420 DALPRVPVN---HVPVGTEDLLTLPGNGESDC 448

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1620NP_001260777.1 ELM2 275..320 CDD:279754 21/48 (44%)
SANT 417..463 CDD:197842 22/45 (49%)
SANT_MTA3_like 417..462 CDD:212559 21/44 (48%)
mier3XP_012815836.1 ELM2 176..222 CDD:279754 21/48 (44%)
SANT 277..322 CDD:197842 22/44 (50%)
SANT_MTA3_like 277..321 CDD:212559 21/43 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 65 1.000 Domainoid score I9882
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 192 1.000 Inparanoid score I3737
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1062529at2759
OrthoFinder 1 1.000 - - FOG0001261
OrthoInspector 1 1.000 - - otm47638
Panther 1 1.100 - - O PTHR10865
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3763
SonicParanoid 1 1.000 - - X1119
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1010.100

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