DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1620 and MTA1-like

DIOPT Version :9

Sequence 1:NP_001260777.1 Gene:CG1620 / 35678 FlyBaseID:FBgn0033183 Length:586 Species:Drosophila melanogaster
Sequence 2:NP_001262293.1 Gene:MTA1-like / 40693 FlyBaseID:FBgn0027951 Length:922 Species:Drosophila melanogaster


Alignment Length:531 Identity:129/531 - (24%)
Similarity:210/531 - (39%) Gaps:142/531 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    86 LNEEEALADMEAHSAED-EIATLREESEMPIEELLAKYGGTAASPAMSSSNRSGSSSRRARRATK 149
            ::||:|     |.:..| .||.|.||...|.:    ..||..::...|.||.||:|:..:.    
  Fly    85 VSEEQA-----AQAVLDPSIAALDEERTSPTQ----TSGGGGSATGNSGSNSSGTSNNNSS---- 136

  Fly   150 RQYQELDTEMAHTSTSTSSSTSQLEKHDGI--DQEEEPKEEADKLASPPESGEASSV-------- 204
                  .|.:...:..:..:....||.:.:  .|..:.|.....|:...||..|:.:        
  Fly   137 ------STAIGGGAGGSGGAGGDAEKGEALTSKQRYQIKHRELFLSRQVESIPATQIRGKCSVTL 195

  Fly   205 --DTEDAQKYEGIKKQHRSHLLDLYPDESFVDLAPTCGEETERFTPLQ-TLFDEVEAEEEEESES 266
              :||..|.|             |..|::|.....        |.|.| ||.    |::.|    
  Fly   196 LNETESLQSY-------------LNKDDTFFYCLV--------FDPNQKTLL----ADKGE---- 231

  Fly   267 ELDDARKIIMVGHDYQAEIPEGLSQYG-DILPYENEDQLIWEPS-QVSEREVEEYLAKIQETRSI 329
                    |.||..||.:||..|.... |....|..:.|:|.|. .:::|:::::|.   .:|||
  Fly   232 --------IRVGSRYQCDIPAKLKDTATDDRKLEELESLVWTPEHSLTDRKIDQFLV---VSRSI 285

  Fly   330 VPPDDGSETTAGEEGAATGATIEPPAPITAPATPPRAPLATSGAGDQELVVKDNEQALHLLVQCG 394
                 |:...|.:   .:.:..:|...::|.|......|.               .|:::|.:..
  Fly   286 -----GTFARALD---CSSSVKQPSLHMSAAAASRDITLF---------------HAMNILHKHE 327

  Fly   395 YDFKEALRRKRMNVLPLT------DTMSSWSEDECLKFEEGIQRFGKDFYQIRQNQVRTRTMREL 453
            |..:|::    .:::|.|      |.:..||..|...|||.::::||||..|||:.:..:|::::
  Fly   328 YSIEESM----SSLVPSTGPVLCRDEIEDWSASEANLFEEALEKYGKDFNDIRQDFLPWKTLKQI 388

  Fly   454 VHFYYLWKKSERRDQS---FALNDTIDHMDVFI---NEAGGGNGSGNGNGAGIVSGTAN------ 506
            :.:||:||.::|..|.   .|:...:....|:|   |..|.|||:....|.||.:||.|      
  Fly   389 IEYYYMWKTTDRYVQQKRVKAVEAELKLKQVYIPQYNNNGKGNGTSTKAGGGIYNGTTNGSTDLS 453

  Fly   507 SNG----SCSPHS-------SNGHSNGD--LSALEKDTIASPRKPASKSYSIMTGSQAVGNPSGG 558
            |||    ||....       |:|||...  ||..|........|.|:|      |....|:   .
  Fly   454 SNGKPCESCGTTKSSQWNSVSSGHSTSRLCLSCWEYWRRYGSMKSATK------GDAGEGD---A 509

  Fly   559 NRKRCSSASLP 569
            .:|..|:||.|
  Fly   510 KKKSSSAASTP 520

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1620NP_001260777.1 ELM2 275..320 CDD:279754 14/46 (30%)
SANT 417..463 CDD:197842 18/45 (40%)
SANT_MTA3_like 417..462 CDD:212559 17/44 (39%)
MTA1-likeNP_001262293.1 BAH_MTA 3..253 CDD:240060 50/223 (22%)
ELM2 232..284 CDD:279754 15/54 (28%)
SANT_MTA3_like 352..397 CDD:212559 17/44 (39%)
SANT 353..398 CDD:197842 18/44 (41%)
ZnF_GATA 458..508 CDD:238123 13/55 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45450192
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10865
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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