DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1620 and Mier2

DIOPT Version :10

Sequence 1:NP_610287.2 Gene:CG1620 / 35678 FlyBaseID:FBgn0033183 Length:586 Species:Drosophila melanogaster
Sequence 2:XP_017450401.1 Gene:Mier2 / 362841 RGDID:1307278 Length:618 Species:Rattus norvegicus


Alignment Length:586 Identity:155/586 - (26%)
Similarity:232/586 - (39%) Gaps:180/586 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 PMSPSSSVAD------------------------TTFEPTIDMMVNDF--------DDEATLNE- 88
            |:|..:.:||                        |.|.||..:::|.|        |.:..|.| 
  Rat    34 PLSSGAQLADYSSSQDCGCGTRSLHGFLPSPDWPTPFRPTPCLLLNPFTVVSMGSADHQFHLTEL 98

  Fly    89 -----------EEALADMEAHSAEDEIATLREESEMPIEELLAKYGGTAASPAMSSSNRSGSSSR 142
                       .|||...:....|.:...:.:.|:||::||||.||..::.|.....:..|.::.
  Rat    99 LTQNYSLQEGCAEALQGPDRPEEELDKDFIDQSSDMPLDELLALYGYESSEPISEQESEGGDTAP 163

  Fly   143 RARRATKRQYQELDTE-----MAHTSTST------SSSTSQLEKH--DGIDQEEEPKEEADKLAS 194
            .....|      ||..     :....|:.      |.|..|:.|.  .| ::|||.:..||.|..
  Rat   164 PLPDMT------LDKAWPFVLVLGVGTAVAILRLLSCSKEQIAKDLLSG-EEEEETQSSADDLTP 221

  Fly   195 PPESGEASSVDTEDAQKYEGIKKQHRSHLLDLYPDESFVDLAPTCGEETERFTPLQTLFDEVEAE 259
            ...|.|||                      ||:.::|           ..||...........:.
  Rat   222 SVTSHEAS----------------------DLFHNQS-----------GSRFLSGDNGPGSSASS 253

  Fly   260 EEEESESELDDARKIIMVGHDYQAEIP-EGLSQYGDILPYENEDQLIWEPSQVSEREVEEYLAKI 323
            :.||.....:..:|.||||..:||::. ..|:::.|.: |||||||:|.|:.:.||||||:|.:.
  Rat   254 DTEEDALPANKCKKEIMVGPQFQADLNILHLNRHCDKI-YENEDQLLWSPTVLPEREVEEFLYRA 317

  Fly   324 QETRSIVPPDDGSETTAGEEGAATGATIEPPAPITAPATPPRAPLATSGAGDQELVVKDNEQALH 388
            .:.|        .:..||                      |:.|     .|:   ||||:||||:
  Rat   318 VKRR--------WQEMAG----------------------PQIP-----EGE---VVKDSEQALY 344

  Fly   389 LLVQCGYDFKEALRRKRMNVLPLTDTMSSWSEDECLKFEEGIQRFGKDFYQIRQNQVRTRTMREL 453
            .||:|.::.:|||||.|.||..:.|.:.:|||:||..||.|.:..||:|:.|:.|:||||::.|.
  Rat   345 ELVKCNFNVEEALRRLRFNVKVIRDGLCAWSEEECRNFEHGFRVHGKNFHLIQANKVRTRSVGEC 409

  Fly   454 VHFYYLWKKSERRDQSFALNDTIDHMDVFINEAGGGNGSGNGNGAGIVSGTANSNGSCSPHSSNG 518
            |.:|||||||||.|. ||....:                  |....:.|||.::.........:|
  Rat   410 VEYYYLWKKSERYDY-FAQQTRL------------------GRRKFVSSGTTDTEQDLDGLDPDG 455

  Fly   519 HSNGDLSALEKDTIASPRKPASKSYSIMTGSQAVGNPSGGNRKRCSSASLPLEDEDNNVEEEPSL 583
            |:.     |:.:| ..|.:|.|....           :||       ...|..|.|:....||..
  Rat   456 HAR-----LQSET-RVPVEPLSADIE-----------AGG-------LDQPGVDSDDLPSSEPGP 496

  Fly   584 S 584
            |
  Rat   497 S 497

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1620NP_610287.2 ELM2 275..325 CDD:460214 24/50 (48%)
SANT_MTA3_like 417..462 CDD:212559 23/44 (52%)
Mier2XP_017450401.1 ELM2 269..319 CDD:460214 24/50 (48%)
SANT_MTA3_like 374..418 CDD:212559 23/43 (53%)

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