DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1620 and mier1a

DIOPT Version :9

Sequence 1:NP_001260777.1 Gene:CG1620 / 35678 FlyBaseID:FBgn0033183 Length:586 Species:Drosophila melanogaster
Sequence 2:NP_955853.1 Gene:mier1a / 321690 ZFINID:ZDB-GENE-030131-409 Length:469 Species:Danio rerio


Alignment Length:523 Identity:168/523 - (32%)
Similarity:240/523 - (45%) Gaps:139/523 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 QPPMSPSSSVA--------DTTFEPTIDMMVNDFDDEATLNEEEALADMEAHSAEDEIATLREES 111
            :|.:|.|.|..        |..|:|:.||:|:|||||.||.|:|.| :.|.:.. :||..|..|.
Zfish     3 EPSLSASGSEGAHAVVQDEDKDFDPSADMLVHDFDDEQTLEEQEKL-EGETNFT-NEIDDLTREG 65

  Fly   112 EMPIEELLAKYG-GTAASPAMSSSNRSGSSSRRARRATKRQYQELDTEMAHTSTSTSSSTSQL-E 174
            ||||||||..|| .:.|||                     :.:|.|.|   ...||.::.|:: |
Zfish    66 EMPIEELLKLYGYSSGASP---------------------EEEEEDVE---EEDSTENACSKVEE 106

  Fly   175 KHDGIDQEEEPKEEADKLASPPESGEASSVDTEDAQKYEGIKKQHRSHLLDLYPDESFVDLAPTC 239
            |.:..||||:  |:.......|.||..|                |.:.||             .|
Zfish   107 KPELSDQEED--EDVQSSGEEPPSGSVS----------------HSTALL-------------IC 140

  Fly   240 GEETERFTPLQTLFDEVEAEEEEESESELDDARKIIMVGHDYQAEIPEGLSQYGD-ILPYENEDQ 303
            ...:       |.||..|.|.|:|.....:|.:|.||||..||||.|.||.:|.| ...|||:||
Zfish   141 SRPS-------TYFDGYEEESEDEEYIPSEDWKKEIMVGSMYQAETPVGLCKYKDNEKVYENDDQ 198

  Fly   304 LIWEPSQVSEREVEEYLAKIQETRSIVPPDDGSETTAGEEGAATGATIEPPAPITAPATPPRAPL 368
            |:|.|..:.|.:|||:|.:..: ||      |.|  ||.:....|:.|                 
Zfish   199 LLWNPELLPEEKVEEFLTEASK-RS------GDE--AGVDAIPEGSHI----------------- 237

  Fly   369 ATSGAGDQELVVKDNEQALHLLVQCGYDFKEALRRKRMNVLPLTDTMSSWSEDECLKFEEGIQRF 433
                        |||||||:.|.:|.::..|||:|.:.:|.|..:.||.|:|:||..||:|::.:
Zfish   238 ------------KDNEQALYELFKCNFNADEALKRLKFDVKPAKEEMSVWTEEECRGFEQGLKDY 290

  Fly   434 GKDFYQIRQNQVRTRTMRELVHFYYLWKKSERRD----------QSFALN-DTIDHMDVFINEAG 487
            ||||..|:.|:||||::.|.|.|||:||||||.|          :.::|. ..:|:|:.|::|..
Zfish   291 GKDFSSIQANKVRTRSVEECVAFYYMWKKSERYDFFAQQIKLGKRKYSLRPGVLDYMECFLDEKE 355

  Fly   488 GGNGSGNGNGAGIVSGTANSNGSCSP-------HSSNG---HSNGDLSALEKDTIASPRKPASKS 542
            .....|:.     :|....||.|.:|       ::.||   ||:..|..::.:|..:....|...
Zfish   356 SSESGGSS-----LSLPTTSNNSKNPLEPESDSNAQNGVENHSSEPLLCVKDETSHTNGSTARPE 415

  Fly   543 YSI 545
            .||
Zfish   416 ISI 418

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1620NP_001260777.1 ELM2 275..320 CDD:279754 25/45 (56%)
SANT 417..463 CDD:197842 24/45 (53%)
SANT_MTA3_like 417..462 CDD:212559 23/44 (52%)
mier1aNP_955853.1 ELM2 169..220 CDD:279754 26/50 (52%)
SANT 275..320 CDD:197842 24/44 (55%)
SANT_MTA3_like 275..319 CDD:212559 23/43 (53%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170581879
Domainoid 1 1.000 62 1.000 Domainoid score I10305
eggNOG 1 0.900 - - E1_KOG1194
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 191 1.000 Inparanoid score I3854
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1062529at2759
OrthoFinder 1 1.000 - - FOG0001261
OrthoInspector 1 1.000 - - otm25086
orthoMCL 1 0.900 - - OOG6_107398
Panther 1 1.100 - - O PTHR10865
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1119
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1211.760

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