DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1620 and Mideas

DIOPT Version :9

Sequence 1:NP_001260777.1 Gene:CG1620 / 35678 FlyBaseID:FBgn0033183 Length:586 Species:Drosophila melanogaster
Sequence 2:NP_001156973.1 Gene:Mideas / 238317 MGIID:2685106 Length:1089 Species:Mus musculus


Alignment Length:667 Identity:138/667 - (20%)
Similarity:208/667 - (31%) Gaps:223/667 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 DSGSLANSDLAVTPTKRERRKS-------------------PATSSDNNSTSV------------ 54
            |.|.:..|.: :..|||.||.|                   .|..|:....||            
Mouse   436 DCGQMIRSGV-IQSTKRRRRVSQEANLLTLAQKAVELASMQDANGSEEKRKSVLATTSRCGVEFS 499

  Fly    55 QP--------------PMSPSSSVADTTFEPTIDMMVNDFDDEATLNEEEALADMEAHSAEDE-- 103
            :|              |:....||...|..||....|...|::.|        .:|.:..|.:  
Mouse   500 EPALAAKRAREESGMVPLIIPVSVPVRTVGPTEVAQVGGADEDGT--------GLEQYPTEHKPS 556

  Fly   104 -IATLREESEMPIEELLAKYGGTAASPAMSSSN--RSGSSSRRARRATKRQ-------------- 151
             |.|.|..:.:|         ||.|:......|  ..|..|.|..:...|.              
Mouse   557 VIVTRRRSTRVP---------GTDAAAQAEDLNVKLEGEPSMRKPKQRPRPEPLIIPTKAGTFIA 612

  Fly   152 ---YQELDTEMAHTSTSTSSSTSQLEKHDGIDQEEEPKEEADKLASPPESGEA----SSVDTEDA 209
               |..:....:|.     .|..:|..|......|.|......:.||...|..    :.:.|.:.
Mouse   613 PPVYSNITPYQSHL-----RSPVRLADHPSERSFEPPPYTPPPILSPVREGSGLYFNAIISTSNI 672

  Fly   210 QKYEGI--KKQHRSHLLDLYPDESFVDLAPTCGEETERFTPLQTLFDEVEAEEEEESESELDDAR 272
            .....|  |..||: ||.....|....:....||.|           .|..|..           
Mouse   673 PAPPPITPKSAHRT-LLRSNSSEVTPPVLSVMGEAT-----------PVSIEPR----------- 714

  Fly   273 KIIMVGHDYQAEIP----EGLSQYGDILPYENEDQLIWEP------SQVSEREVEEYLAKIQETR 327
              |.||..:|||||    ..|:.:.   |::.:  |:|:|      |...:|:|::.|       
Mouse   715 --INVGTRFQAEIPMMRDRALAAFD---PHKAD--LVWQPWEHLESSWEKQRQVDDLL------- 765

  Fly   328 SIVPPDDGSETTAGEEGAATGATIEPPAPITAPATPPRAPLATSGAG-DQELVVKDNEQALHLLV 391
                             .|..::|.|                  ||| :|||       |||.|.
Mouse   766 -----------------TAACSSIFP------------------GAGTNQEL-------ALHYLH 788

  Fly   392 QCGYDFKEALRR--KRMNVLPLTDTMSS--------WSEDECLKFEEGIQRFGKDFYQIRQNQVR 446
            :...|..|||.:  .|..:.|....:::        |...|...|.:||..:.|||:.: |..::
Mouse   789 ESRGDILEALNKLLLRKPLRPHNHPLATYHYTGSDQWKTAERKLFNKGIAIYKKDFFLV-QKLIQ 852

  Fly   447 TRTMRELVHFYYLWKKSERRDQSFALNDTIDHMDVFINEAGGGNGSGNGNGAGIVSGTANSNGSC 511
            |:|:.:.|.|||.:||..:    ...|.|:...|:.|.:...|.     ....:...|:......
Mouse   853 TKTVAQCVEFYYTYKKQVK----IGRNGTLTFGDLDIGDEKSGQ-----EEVEVDVKTSQKFPRV 908

  Fly   512 SPHSSNGHSNGDLSALEKDTIASPRKPASKSYSIMTGSQAVGNPSGGNRKRCSSA-------SLP 569
            .|......|...|.  .|..:..|||...:.   :..:|..|....| |:||..|       :|.
Mouse   909 PPPRRESPSEERLE--PKREVTEPRKEGEEE---VPDTQEKGEQEEG-RERCRRAAAVKATQTLQ 967

  Fly   570 LEDEDNNV----EEEPS 582
            ..:..|:|    ..||:
Mouse   968 ANEAANDVLILRSHEPN 984

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1620NP_001260777.1 ELM2 275..320 CDD:279754 16/54 (30%)
SANT 417..463 CDD:197842 16/53 (30%)
SANT_MTA3_like 417..462 CDD:212559 15/52 (29%)
MideasNP_001156973.1 ELM2 715..770 CDD:366648 18/83 (22%)
SANT 824..868 CDD:389774 15/44 (34%)
PTZ00121 <887..>1068 CDD:173412 21/109 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1194
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.