Protein Alignment CG1620 and Rcor3

DIOPT Version :9

• Sequence 1: NP_001260777.1
• Gene: CG1620 / 35678
• FlyBaseID: FBgn0033183
• Length: 586
• Species: Drosophila melanogaster
• Sequence 2: XP_030108730.2
• Gene: Rcor3 / 214742
• MGIID: 2441920
• Length: 633
• Species: Mus musculus
• Alignment Length: 480
• Identity: 94/480 - (19%)
• Similarity: 142/480 - (29%)
• Gaps: 223/480 - (46%)

  Fly     1 MME-----FGKSSDHSQHSASEASADSGSLANSDLAVTPTKRERRKSPA---TSSDNNSTSVQPP 57
            |||     .|||          .||:.|:                ||||   .||.|.......|
Mouse     4 MMEKGPELLGKS----------RSANGGA----------------KSPAGGGGSSANGGLHFSEP 42

  Fly    58 MSPSSSVADTTFEPTIDMMVNDFDDEATLNEEEALADMEAHSAEDEIATLREESEMPIEELLAKY 122
            .|..||                 |||              |......:..|..:..|...||
Mouse    43 ESGCSS-----------------DDE--------------HGGTSPRSPPRPSARPPPRALL--- 73

  Fly   123 GGTAASPAMSSSNRSGSSSRRARRATKRQYQELDTEMAHTSTSTSSSTSQLEKHDGIDQEEEPKE 187
                  |:..|..|..|..||:.|....:        .|.:|::.:.               |:.
Mouse    74 ------PSEPSRGRRNSRCRRSPRPAPPR--------PHPATASPAL---------------PRL 109

  Fly   188 EADKLASPPESGEASSVDTEDAQKYEGIKKQHRSHLLDLY--PDESFVDLAPTCGEETERFTPLQ 250
            |:..||.|..|                      .:||..|  ....|.|:.
Mouse   110 ESLCLALPLSS----------------------PYLLPFYHISWHCFADVG-------------- 138

  Fly   251 TLFDEVEAEEEEESESELDDARKIIMVGHDYQAEIPE---GLSQYGDILPYENEDQLIWEP-SQV 311
                                    :.||.:|||.|||   |.::|.|   .:|...|:|.| ..:
Mouse   139 ------------------------MRVGAEYQARIPEFDPGATKYTD---KDNGGMLVWSPYHSI 176

  Fly   312 SEREVEEYLAKIQETRSIVPPDDGSETTAGEEGAATGATIEPPAPITAPATPPRAPLATSGAGDQ 376
            .:.:::||:|..:|..                    |..:
Mouse   177 PDAKLDEYIAIAKEKH--------------------GYNV------------------------- 196

  Fly   377 ELVVKDNEQALHLLVQCGYDFKEALRRKRMNVLPLTDTMSSWSEDECLKFEEGIQRFGKDFYQIR 441
                   ||||.:|....::.:::| ....|..|..|   .|:.::.:.||:.....||.|::|:
Mouse   197 -------EQALGMLFWHKHNIEKSL-ADLPNFTPFPD---EWTVEDKVLFEQAFSFHGKSFHRIQ 250

  Fly   442 QNQVRTRTMRELVHFYYLWKKSERR 466
            | .:..:|:..||.:||.|||:..|
Mouse   251 Q-MLPDKTIASLVKYYYSWKKTRSR 274

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG1620	NP_001260777.1	ELM2	275..320	CDD:279754	16/48 (33%)
		SANT	417..463	CDD:197842	15/45 (33%)
		SANT_MTA3_like	417..462	CDD:212559	14/44 (32%)
Rcor3	XP_030108730.2	ELM2	139..190	CDD:396160	18/53 (34%)
		SANT	226..270	CDD:419695	14/44 (32%)
		Myb_DNA-binding	427..470	CDD:395191

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	41	1.000	Domainoid score	I12445
eggNOG	1	0.900	-	-		E1_KOG1194
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	3	2.810