Protein Alignment CG1620 and Rcor1

DIOPT Version :9

• Sequence 1: NP_001260777.1
• Gene: CG1620 / 35678
• FlyBaseID: FBgn0033183
• Length: 586
• Species: Drosophila melanogaster
• Sequence 2: XP_017449463.2
• Gene: Rcor1 / 102554884
• RGDID: 7505493
• Length: 481
• Species: Rattus norvegicus
• Alignment Length: 381
• Identity: 77/381 - (20%)
• Similarity: 122/381 - (32%)
• Gaps: 135/381 - (35%)

  Fly   129 PAMSSSNRSGSSSRRARRATKRQYQELDTEMAHTSTSTSSSTSQLEKHDGIDQEEEPKEEADKLA 193
            |||.......|..||.|          :|..|..|.:.:|:.|                .|...|
  Rat     2 PAMVEKGPEVSGKRRGR----------NTASAAASAAAASAAS----------------AAASAA 40

  Fly   194 SPPESGEASSVDTEDAQKYEGIKKQHRSHLLDLYPDESFVDLAPTCGEETERFTPLQTLFDEVEA 258
            :...:..||:..|..|.                        .||..|:................:
  Rat    41 ASAGTASASAAATASAA------------------------AAPNNGQNKSLAAAAPNGNSGSNS 81

  Fly   259 EEEEESESELDDAR--KIIMVGHDYQAEIPE-------GLSQYGDILPYENEDQLIWEPSQ-VSE 313
            .||..|.|..|:..  ..:.||..|||.:|:       ..||..|     |...|:|.|:| :||
  Rat    82 WEEGSSGSSSDEEHGGGGMRVGPQYQAAVPDFDPAKLARRSQERD-----NLGMLVWSPNQSLSE 141

  Fly   314 REVEEYLAKIQETRSIVPPDDGSETTAGEEGAATGATIEPPAPITAPATPPRAPLATSGAGDQEL 378
            .:::||:|..:|....
  Rat   142 AKLDEYIAIAKEKHGY------------------------------------------------- 157

  Fly   379 VVKDNEQALHLLVQCGYDFKEALRRKRMNVLPLTDTMSSWSEDECLKFEEGIQRFGKDFYQIRQN 443
               :.||||.:|....::.:::| ....|..|..|   .|:.::.:.||:.....||.|::|:|
  Rat   158 ---NMEQALGMLFWHKHNIEKSL-ADLPNFTPFPD---EWTVEDKVLFEQAFSFHGKTFHRIQQ- 214

  Fly   444 QVRTRTMRELVHFYYLWKKS---------ERRDQSFALNDTIDHMDVFINEAGGGN 490
            .:..:::..||.|||.|||:         ..|.|.....::.|.::    |..|.|
  Rat   215 MLPDKSIASLVKFYYSWKKTRTKTSVMDRHARKQKREREESEDELE----EPNGSN 266

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG1620	NP_001260777.1	ELM2	275..320	CDD:279754	17/52 (33%)
		SANT	417..463	CDD:197842	15/45 (33%)
		SANT_MTA3_like	417..462	CDD:212559	14/44 (32%)
Rcor1	XP_017449463.2	ELM2	100..153	CDD:396160	19/57 (33%)
		SANT	189..233	CDD:419695	14/44 (32%)
		Myb_DNA-binding	380..423	CDD:395191

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG1194
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.810