DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1620 and mier1

DIOPT Version :10

Sequence 1:NP_610287.2 Gene:CG1620 / 35678 FlyBaseID:FBgn0033183 Length:586 Species:Drosophila melanogaster
Sequence 2:XP_002939019.1 Gene:mier1 / 100497961 XenbaseID:XB-GENE-974218 Length:503 Species:Xenopus tropicalis


Alignment Length:549 Identity:166/549 - (30%)
Similarity:238/549 - (43%) Gaps:147/549 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 SPSSSVA--DTTFEPTIDMMVNDFDDEATLNEEEALADMEAHSAEDEIATLREESEMPIEELLAK 121
            ||..|.|  |..|||:.||:|::||||.||.|||.|......|:  ||..|..||||||:|||..
 Frog    10 SPGGSAASDDHEFEPSADMLVHEFDDERTLEEEEMLEGEVNFSS--EIEHLERESEMPIDELLRL 72

  Fly   122 YGGTAASPAMSSSNRSGSSSRRARRATKRQYQELDTEMAHTSTSTSSSTSQLEKHDGIDQEEEPK 186
            ||                                           ..||..|...:..::|||.:
 Frog    73 YG-------------------------------------------YGSTVPLPGEEEEEEEEEEE 94

  Fly   187 EEADKLASPPESGEASSVDTEDAQKYEGIKKQHRSHLLDLYPDESFVDLAPTCGEETERFTPLQT 251
            ||.:.:.:...||.:..:..|..:...|.:.:.:|...:..|       :.||.:..|...|.:.
 Frog    95 EEEEDVDNDGNSGCSGEIKDEAIKDSSGQEDETQSSNDEPTP-------SGTCRDVREVIRPRRC 152

  Fly   252 LFDEVEAEEEEESESELD-----DARKIIMVGHDYQAEIPEGLSQYGDI-LPYENEDQLIWEPSQ 310
            .:.:...|.|||||.:.|     |.:|.||||..:|||||.|:..|.:. ..|||:|||:|.|..
 Frog   153 KYFDANNEIEEESEDDEDYVPSEDWKKEIMVGSMFQAEIPVGICSYRETEKVYENDDQLLWNPEY 217

  Fly   311 VSEREVEEYLAKIQETRSIVPPDDGSETTAGEEGAATGATIEPPAPITAPATPPRAPLATSGAGD 375
            |.|..|.::|            ::.|..|..|:|                       |.....|.
 Frog   218 VIEDRVIDFL------------NEASRRTGEEKG-----------------------LEAIPEGS 247

  Fly   376 QELVVKDNEQALHLLVQCGYDFKEALRRKRMNVLPLTDTMSSWSEDECLKFEEGIQRFGKDFYQI 440
            .   :|||||||:.||:|.:|.:|||||.|.||....:.:|.|:|:||..||:|::.:||||:.|
 Frog   248 H---IKDNEQALYELVKCNFDTEEALRRLRFNVKAAREELSIWTEEECRNFEQGLKAYGKDFHLI 309

  Fly   441 RQNQVRTRTMRELVHFYYLWKKSERRD----------QSFALNDTI-DHMDVFINEAGGGNGSGN 494
            :.|:||||::.|.|.|||:||||||.|          :.:.|:..: |:||..::|:.....|..
 Frog   310 QANKVRTRSVGECVAFYYMWKKSERYDFFAQQTRFGKKKYNLHPGVTDYMDRLLDESESATSSRA 374

  Fly   495 GNGAGIVSGTANS-------------------NGSCS-----PHSSNG-HSNG------DLSALE 528
            .:.....|.::.|                   ||.|:     ..:..| |.||      |.|..|
 Frog   375 PSPPPTTSNSSTSQSEKEECTASNNTQNGVSVNGPCAMTAYKDEAKQGVHLNGPTMSSSDPSPNE 439

  Fly   529 KDTIASPRKPASKSYSIMTGSQAVGNPSG 557
            .||....|:.       :||.....:.||
 Frog   440 TDTNGYNREN-------ITGDSRFSHISG 461

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1620NP_610287.2 ELM2 275..325 CDD:460214 23/50 (46%)
SANT_MTA3_like 417..462 CDD:212559 23/44 (52%)
mier1XP_002939019.1 ELM2 181..230 CDD:460214 23/60 (38%)
SANT_MTA3_like 287..331 CDD:212559 23/43 (53%)
MIER1_3_C 341..>367 CDD:437258 5/25 (20%)

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