DRSC/TRiP Functional Genomics Resources

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Protein Alignment Coop and CG8765

DIOPT Version :10

Sequence 1:NP_610286.2 Gene:Coop / 35677 FlyBaseID:FBgn0263240 Length:358 Species:Drosophila melanogaster
Sequence 2:NP_649141.1 Gene:CG8765 / 40147 FlyBaseID:FBgn0036900 Length:690 Species:Drosophila melanogaster


Alignment Length:439 Identity:88/439 - (20%)
Similarity:160/439 - (36%) Gaps:121/439 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 AYNASSSAASVGSASAAASATASFAFTNTAKL---PIETV--------KRLIAAVSRRPMLWLRN 57
            |.|.|||||::.|..:..|| |....||..:.   ||.|.        |.||..:.:..|::...
  Fly   270 AANQSSSAATITSNVSTTSA-AHNQSTNAEEEDDDPIHTFLNMESYFEKELITLIQQEDMIYNYG 333

  Fly    58 NANGQKRSDITPVWFEVGQDVNLPADICRIKWGHLRDNFRKVY--IRNNLSNETPSSWRFYNDMR 120
            |.|.:.......||.|:.:.:......||:||..|||.:.:.:  :|..:..:..|.|:.||.:.
  Fly   334 NENYRNAKLKMEVWEEIARKLKKSVKQCRLKWKALRDQYAREHKRLRTLMHIDATSRWKHYNSLS 398

  Fly   121 FMEPAVHENIMRQTRSSS---KKHPP-----GHWTENNNVLGPDKYDSMPIVATEPICELSHSYD 177
            |::..:.:..:......|   .|:.|     .|.|:::         |.|   |:.|...|.|.:
  Fly   399 FLQKYIQQKTLESDSQLSMLLPKNDPVRELEDHMTQSH---------SPP---TQQITLESSSSN 451

  Fly   178 SELHQPSFSDISSFFEDRDCQPPENKRFKSEPSQREE---------------------------- 214
            |:|:.|:...::...:....|..:.:..:.:..|:.:                            
  Fly   452 SQLNLPTLPHLTGPHKAEQQQQQQQQEEQHQQQQQHQQQQQQQQASELCVATYDDMDIENYINGD 516

  Fly   215 ----DEEDDDDFDEDAASENLEEERGNRADAASSGVFTIEVLDDDDEMEQAV-----TKTKANNT 270
                |::.:||.||:..:....|:...:.|   ..|.|.:  .:|..:..||     ..:|....
  Fly   517 VHHNDDDVEDDEDEEMETTTAAEQPPQQQD---QHVMTYD--HEDGPVYMAVPSVGSAMSKQEQL 576

  Fly   271 SHGGSSLKSEQEAKV---------------FSN-SQSPTADLPFKYISTDV-----------ATN 308
            |.|.:||:::|....               :.| :.:|::....:|.|..:           ::|
  Fly   577 SDGATSLENQQLQSTAEFQKIEIQTPTTPRYQNAATTPSSTSTSRYHSAPITPSKPTHMEYPSSN 641

  Fly   309 TDPSGGDLQDEADRMFLLSLMPFLQRLDSRRRLRVRQKLQNVLIEELEF 357
            ...||.|  ||....|                ..|..|::|..:|.:.|
  Fly   642 GHNSGED--DEIGAFF----------------KAVSMKIRNAQLEPVAF 672

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CoopNP_610286.2 MADF 42..124 CDD:214738 21/83 (25%)
BESS 320..353 CDD:460758 4/32 (13%)
CG8765NP_649141.1 MADF 42..123 CDD:214738
MADF 318..405 CDD:214738 21/86 (24%)
Blue background indicates that the domain is not in the aligned region.

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