DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Coop and LOC1273217

DIOPT Version :10

Sequence 1:NP_610286.2 Gene:Coop / 35677 FlyBaseID:FBgn0263240 Length:358 Species:Drosophila melanogaster
Sequence 2:XP_312172.4 Gene:LOC1273217 / 1273217 VectorBaseID:AGAMI1_003692 Length:255 Species:Anopheles gambiae


Alignment Length:217 Identity:46/217 - (21%)
Similarity:80/217 - (36%) Gaps:48/217 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 PIETVKRLIAAVSRRPMLWLRNNANGQKRSDITPVWFEVGQDVNLPADICRIKWGHLRDNFRKVY 100
            |:.:..:||..|.|:|:||...:.....|......|.|:...:....::|:.||..||:.:|:..
Mosquito    49 PLFSEPKLIELVKRKPLLWNHKDPYYNNRKLEKDCWAEISDLLETDIEMCKKKWQGLRNQYRREL 113

  Fly   101 IRNNLSNETPSSWRFYNDMRFMEPAVHENIMRQTRSSSKKHPPGHW----------------TEN 149
            :|..     .|.|:.|..:.|         :.:..:|..|...||.                .|.
Mosquito   114 LRTK-----NSKWKHYQRLSF---------LAEVLTSKAKSRSGHSEGEDDDPIRIERSDTPMEQ 164

  Fly   150 NNVLGPDKYDSMP----IVATEPICELSHSYDSEL----HQPSFSDISSFFEDRDCQPPENK--- 203
            |:....:.||| |    :||.|...|.:|:....:    |..::....|..|..:..|..|:   
Mosquito   165 NSSFMEELYDS-PYSNGVVAKEEPKETAHTIPPAVGNVAHNSNYYFALSLVELLNAIPKRNQLAA 228

  Fly   204 ------RFKSEPSQREEDEEDD 219
                  :....|::.||..:.|
Mosquito   229 RIAILSKINEFPTEHEEVGQGD 250

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CoopNP_610286.2 MADF 42..124 CDD:214738 21/81 (26%)
BESS 320..353 CDD:460758
LOC1273217XP_312172.4 None
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.