DRSC/TRiP Functional Genomics Resources

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Protein Alignment p47 and AT3G21660

DIOPT Version :10

Sequence 1:NP_610284.1 Gene:p47 / 35674 FlyBaseID:FBgn0033179 Length:407 Species:Drosophila melanogaster
Sequence 2:NP_001327364.1 Gene:AT3G21660 / 821720 AraportID:AT3G21660 Length:438 Species:Arabidopsis thaliana


Alignment Length:414 Identity:105/414 - (25%)
Similarity:181/414 - (43%) Gaps:85/414 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 YWSTQADLPVPVPTVGH-ADNP---KPKPTSSSGASASASAAGATKS-ADSAV----ATSSASVD 95
            |..::..|..|.|::.. |.||   :.|....:|.......:|.|.| :|.||    ...:.:::
plant    61 YSPSRLQLRPPWPSLKRAAANPFSRQNKRRQGAGNVRIDDFSGGTGSDSDEAVEHYGGEENRAIE 125

  Fly    96 IAPAATKAKPKFATLSDMSKESSS----DDDQQAF------YAGG--SDRSGQQVLGPPKRKNFR 148
                    :|:.::.| ||:|:.|    ::.|:.|      ::.|  .|.|..:.|..|:...|.
plant   126 --------RPEQSSRS-MSEETVSSELEEEPQKVFTHTVTSWSNGFTVDDSSLKTLDDPENATFL 181

  Fly   149 EQLTDM--------------MRSAQEQNIAEVGPSTSSGSASGGSGGAVWGQGMRLGMTDNDHTA 199
            |.::.|              :.|.:|:|..|....:.|.|.......|:..:...:..::.....
plant   182 EIISSMESPRELGQVRVQVKIISREEENYTESQAGSDSASTKPPPALAMRAKESAIERSEQSSKV 246

  Fly   200 VGTKKPAATI-----ENKPVVV----LKLWSQGFSIDGGELRHYDDPQNKEFLETVMRGEIPQEL 255
            :..:..:|.:     |::|..|    :.:|..||::|....:..|||:|..|||.:...|.|:.|
plant   247 LSGETDSAELQEQQQEDQPYEVVTYTVTIWRNGFTVDDDPFKSLDDPENAAFLERITSLESPRLL 311

  Fly   256 LEMGRMVN-VDVEDHRHEDFKRQPVPQTFKGSGQKLGSPVANLVTEAP---TVPVALSPGEAANQ 316
            ..:...|. :..|::..|       .||..||        .:..||.|   |.|.::|       
plant   312 DPLRVQVKLIKCEENFSE-------LQTLAGS--------ESTSTEPPLTTTQPPSMS------- 354

  Fly   317 EASARDAINLNSEAPSTTLQIRLADGSRLAAQFNLSHTVSDIRRFIQTARPQYSTSNFILVSSFP 381
                  ::.::..||:|::|:.|||.:|:..|||..||:.|||.||.|:||..|....:|:...|
plant   355 ------SLVVDPAAPTTSIQLILADSTRIVTQFNTHHTIRDIRCFIDTSRPDGSKDYQLLIMGSP 413

  Fly   382 TRELSDDNSTIEKAGLKNAALMQR 405
            ...|||.:.||||||:.|:.|:|:
plant   414 PTPLSDFDQTIEKAGIANSVLVQK 437

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
p47NP_610284.1 UBA_ceTYDP2_like 6..42 CDD:270612 1/1 (100%)
SEP 211..300 CDD:197786 23/93 (25%)
UBX_UBXN2 334..405 CDD:340468 32/70 (46%)
AT3G21660NP_001327364.1 SEP 148..222 CDD:470648 15/73 (21%)
SEP 273..>327 CDD:462348 16/53 (30%)
UBX_UBXN2 366..437 CDD:340468 32/70 (46%)

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