Protein Alignment p47 and ubx3

DIOPT Version :10

• Sequence 1: NP_610284.1
• Gene: p47 / 35674
• FlyBaseID: FBgn0033179
• Length: 407
• Species: Drosophila melanogaster
• Sequence 2: NP_593429.1
• Gene: ubx3 / 2543170
• PomBaseID: SPAC343.09
• Length: 410
• Species: Schizosaccharomyces pombe
• Alignment Length: 438
• Identity: 130/438 - (29%)
• Similarity: 194/438 - (44%)
• Gaps: 68/438 - (15%)

  Fly     4 RGDLIAQFIEITGTDENVARFYLSSCDWDIEHALGNYWSTQADLPVPVPTVGHADNPK------P 62
            |.|::.:|......|.:..||:|.|.:|:.|.|      |.....|..|...|...|.      |
pombe     3 REDILKEFCNRNNIDVSQGRFFLESTNWNYELA------TALLHEVIPPEEDHGLQPSSDVSKVP 61

  Fly    63 KPT-SSSGASASASAAGATKSADSAVATSSASVDIAPAATKAKPKFATLSDMSKESSSDDDQQAF 126
            :.| ||||.|      |..:.....:.....:......:..|..|||||.|:.....|.:::...
pombe    62 EVTGSSSGIS------GGDQQPPRPLQRQQNTQGQGMKSGTASKKFATLRDLEGNDESAEEKSHL 120

  Fly   127 YAGGSDRSGQQVL-GPPKRKNFREQLTDMMRSAQEQNIAEVGPSTSSGSASGGSGGAVWGQGMRL 190
            :.|| ::||..|. |.|..|  ::.:.|::..|::..|:.:....|..|:...|..:|   |.||
pombe   121 FTGG-EKSGLSVEDGDPDPK--KQLVRDILEKARQHTISPLDEQDSGPSSLASSWASV---GQRL 179

  Fly   191 GMTDNDHTAVGTKKPAATI----ENKPVV---------VLKLWSQGFSIDGGELRHYDDPQNKEF 242
            | |:|:  |.|:..|....    ||.|..         .|..|..|||:|.|.:..||||.|:|.
pombe   180 G-TENE--ASGSTTPVTQSGPPRENPPTESQPEKPLRRTLYFWRNGFSVDDGPIYTYDDPANQEM 241

  Fly   243 LETVMRGEIPQELL--EMGRMVNVDVEDHRHEDFKRQPVPQTFKGSGQKLGSPV---------AN 296
            |..:..|..|..||  .|.:.::|.|:....||:.....|  |.|.||:|||..         ..
pombe   242 LRYINSGRAPLHLLGVSMNQPIDVVVQHRMDEDYVAPFKP--FSGKGQRLGSTYMQPRMSQMPGG 304

  Fly   297 LVTEAPT---VPVALSPGEAANQEASARDAINLNSEAPSTTLQIRLADGSRLAAQFNLSHTVSDI 358
            |.|:..|   ||:.:.|     ...:...::.::...|:|.:|:||::|.|.....|||||:.||
pombe   305 LYTDTSTSSSVPINVKP-----NSTTPHASLQIDENKPTTRIQVRLSNGGRTVLTVNLSHTLHDI 364

  Fly   359 RRFIQTARPQYSTSNFILVSSFPTRELSDDNS-TIEKAGLKNAALMQR 405
            ...::...|    .||||...||.:.|.||.| |:|.|.||||:|:|:
pombe   365 YEAVRAVSP----GNFILSVPFPAKTLEDDPSVTVEAASLKNASLVQK 408

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
p47	NP_610284.1	UBA_ceTYDP2_like	6..42	CDD:270612	10/35 (29%)
		SEP	211..300	CDD:197786	34/108 (31%)
		UBX_UBXN2	334..405	CDD:340468	31/71 (44%)
ubx3	NP_593429.1	UBA_p47	4..41	CDD:270533	11/42 (26%)
		SEP	210..299	CDD:197786	31/90 (34%)
		UBX_UBXN2	340..408	CDD:340468	31/71 (44%)