DRSC/TRiP Functional Genomics Resources

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Protein Alignment p47 and Ubxn2a

DIOPT Version :9

Sequence 1:NP_610284.1 Gene:p47 / 35674 FlyBaseID:FBgn0033179 Length:407 Species:Drosophila melanogaster
Sequence 2:NP_663416.1 Gene:Ubxn2a / 217379 MGIID:2442310 Length:258 Species:Mus musculus


Alignment Length:273 Identity:84/273 - (30%)
Similarity:131/273 - (47%) Gaps:46/273 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   153 DMMRSAQEQNIAEVGPSTSSGSASGGSGGAVWGQGMRLGMTDNDHT--------------AVGTK 203
            |.:.|.:|:...|.||..|.                  .:.||...              ..|.|
Mouse     5 DNLDSIKEEWACETGPPDSQ------------------PLNDNQQKDCEYFVDSLFEEAGKAGAK 51

  Fly   204 KPAATIENKPV-VVLKLWSQGFSIDGGELRHYDDPQNKEFLETVMRGEIPQELLEM--GRMVNVD 265
            ..:.|.:.|.| |.:|||..||::: .:.|.|.|..:::||.::.:||:|.||..:  ...|:|.
Mouse    52 CLSPTEQKKQVDVNIKLWKNGFTVN-DDFRSYSDGASQQFLNSIKKGELPSELWGIFDKEEVDVK 115

  Fly   266 VEDHRHE-DFKRQPVPQTFKGSGQKLGSPVANLVTEAPTVPVALSPGEAANQEASARDAINLNSE 329
            |||.::| ....:||.|.|.|.|.:|||....:|::|.:|.|         ...|...|::||:.
Mouse   116 VEDKKNEVCMSTKPVFQPFSGQGHRLGSATPRIVSKAKSVEV---------DNKSTLSAVSLNNL 171

  Fly   330 APSTTLQIRLADGSRLAAQFNLSHTVSDIRRFIQTARPQYSTSNFILVSSFPTRELSDDNSTIEK 394
            .|.|.:||.||:|.|...:||:||.||.|:.||:..:....:..|.|.::.|.....|:..|:|:
Mouse   172 EPITRIQIWLANGERTVQRFNVSHRVSHIKDFIEKYQGSQRSPPFALATALPFLRFLDETLTLEE 236

  Fly   395 AGLKNAALMQRLK 407
            |.||||.::|||:
Mouse   237 ADLKNAVIIQRLQ 249

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
p47NP_610284.1 UBA_ceTYDP2_like 6..42 CDD:270612
SEP 211..300 CDD:197786 34/92 (37%)
p47_UBX 329..407 CDD:176365 30/77 (39%)
Ubxn2aNP_663416.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..30 8/42 (19%)
SEP 66..138 CDD:285322 26/72 (36%)
p47_UBX 171..249 CDD:176365 30/77 (39%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2086
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1175850at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23333
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1594
SonicParanoid 1 1.000 - - X629
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
76.910

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