DRSC/TRiP Functional Genomics Resources

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Protein Alignment p47 and ubxn2b

DIOPT Version :10

Sequence 1:NP_610284.1 Gene:p47 / 35674 FlyBaseID:FBgn0033179 Length:407 Species:Drosophila melanogaster
Sequence 2:XP_004915243.2 Gene:ubxn2b / 101733824 XenbaseID:XB-GENE-13579709 Length:351 Species:Xenopus tropicalis


Alignment Length:379 Identity:113/379 - (29%)
Similarity:187/379 - (49%) Gaps:68/379 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 DNPKPKPTSSSGASASASAAGATKSADSAVATSSASVDIAPAATKAKPKFATLSD---------- 112
            |:...:.....|.|......||.:..:..:..|     :.|:....:...|.|.:          
 Frog    12 DDAGEEGEEDQGCSEDGGEVGAEREKEVELKDS-----LRPSVLDLQLALARLCEDEYRDQPSKM 71

  Fly   113 --MSKESSSDDDQQAFYAGGSDRSGQQVLGPPKRKNFREQLTDMMRSAQEQNIAEVGPSTSSGSA 175
              :..:.:.|...:..|:|.:     ::..|.|..|      ::.:.|:|.....:..::.    
 Frog    72 PVLGLQINEDHSFERSYSGNA-----KIPSPGKIVN------ELFKEAKEHGAIPIDDASK---- 121

  Fly   176 SGGSGGAVW------GQGMRLGMTDNDHTAVGTKKPAATIENKP--------VVVLKLWSQGFSI 226
               |.||.:      |:|.:||.:        :|:....|:.:.        .::|||||.|||:
 Frog   122 ---SSGAFYKARTFTGRGYKLGNS--------SKRELEYIQGEEPFEQGQEIQILLKLWSNGFSL 175

  Fly   227 DGGELRHYDDPQNKEFLETVMRGEIPQELLEM--GRMVNVDVEDHRHEDFKRQPVP-QTFKGSGQ 288
            |.||||.|.||.|.||||:|.:||||.||..:  |..||:|:|||:.:::.:..:. :.|.|.|:
 Frog   176 DDGELRSYSDPINAEFLESVKKGEIPVELQRLIHGGQVNLDMEDHQDQEYVKPRLKFKAFSGEGK 240

  Fly   289 KLGSPVANLVTEAPTVPVALSPGEAANQEASARDAINLNSEAPSTTLQIRLADGSRLAAQFNLSH 353
            ||||    |..|..:.|  .||.|...:..:|.  ::|:...|:|.:|||||||:||..:|||||
 Frog   241 KLGS----LTPEIISTP--SSPEEEHKRFLNAE--VDLDEHVPTTKIQIRLADGTRLIQRFNLSH 297

  Fly   354 TVSDIRRFIQTARPQYSTSNFILVSSFPTRELSDDNSTIEKAGLKNAALMQRLK 407
            .:.|:|.:|..||..::..:|.||::||..||:|::.|:|:|.:.|..::||||
 Frog   298 RIMDVRHYIIHARSDFAQCDFALVTTFPFVELTDESQTLEEADILNTVILQRLK 351

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
p47NP_610284.1 UBA_ceTYDP2_like 6..42 CDD:270612
SEP 211..300 CDD:197786 43/99 (43%)
UBX_UBXN2 334..405 CDD:340468 31/70 (44%)
ubxn2bXP_004915243.2 SEP 160..252 CDD:197786 44/95 (46%)
Ubl1_cv_Nsp3_N-like 270..351 CDD:475130 36/80 (45%)
Blue background indicates that the domain is not in the aligned region.

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