DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11127 and F54D10.8

DIOPT Version :9

Sequence 1:NP_610283.1 Gene:CG11127 / 35673 FlyBaseID:FBgn0033178 Length:449 Species:Drosophila melanogaster
Sequence 2:NP_494663.2 Gene:F54D10.8 / 186235 WormBaseID:WBGene00018809 Length:457 Species:Caenorhabditis elegans


Alignment Length:522 Identity:109/522 - (20%)
Similarity:165/522 - (31%) Gaps:208/522 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MRKYQQLVLLLISCLSVSILLMYKTENNRLKYVLK--------------------------YVNF 39
            |:.:.::.:.::..|.|..||:||      .||.|                          |::.
 Worm     1 MKHFPRIAVFILLLLVVIGLLLYK------DYVQKSYSRNLDGKCHVASWNQVHTDSEFQSYIDM 59

  Fly    40 FGRNDAAVLRRL----EN-----GTKEDGAQVLWRPLPV---WQVIGDSFHAYSAFW--MRNELV 90
            |.|   .:.|||    ||     .|...||.|..:.:.:   .|.:... ..|..::  .|.||:
 Worm    60 FSR---WLWRRLNLSVENNQNYTSTSILGAYVYPKLISISLTSQYLSQQ-KIYCRYYDCKRRELL 120

  Fly    91 AGGEAHVLVVGKKGAVVDFRCSLDLLGGRSVQGKFRFQRDSIESLVDDKSSNFTSYHFFCQVSRD 155
              |.|:..||..:..|   .|.               :|...|               |..||..
 Worm   121 --GSAYESVVFPESVV---HCP---------------RRAGAE---------------FVSVSSG 150

  Fly   156 FGQPGSVSFTDITTTRSPVRLRLRNLRPASKKDDDKVVAVAHRLPATVCV-DLVGFNMTSKFARN 219
            |.          ::|..||||       :.|..|:.|    |.|  :||| .|.|         |
 Worm   151 FN----------SSTPEPVRL-------SFKAYDEPV----HDL--SVCVAPLYG---------N 183

  Fly   220 ENALLQFFLFHQALGIEN-----FLV-----YNHDELPEEVHHLLERTNIHLYGLPFNFPFQQSN 274
            |:..||...|.:.:.:|.     |.|     |:...|.|.|     ||.      .....|.|..
 Worm   184 ESKWLQIVDFVEHMKLEGATYFYFYVGTINDYDRKMLTEYV-----RTG------DVEVTFLQDK 237

  Fly   275 GTRSRI--HQLLLTDCLLRNVNHAGFTLLLRPNELFF---------------PNS---------- 312
            ..|...  |.|::.||.||:..|:.:...|..:|...               |.|          
 Worm   238 FERPAYAWHLLMMQDCHLRSKYHSKWITFLDLDERISSGTEYNNLLEVIESQPRSVGELHVSVLN 302

  Fly   313 --KFSGDQVKGSLQQQLR----------------HFSSEITRFE-LATMSVCFDDRKKLLPDNVQ 358
              |:.....|.:..:||:                :.|..|.|.| :..|.:.:...|:...:.|:
 Worm   303 ILKYEDTPEKFTSMEQLKEDMMFRKWTNTIDPTWNASKAIVRPEQIGIMFIHYAIAKQFGVNTVK 367

  Fly   359 YDPERRS--EFKTLLNRLELPPAQLLASTSD------------VELSLSTGFV----HRY----V 401
            .:..:.:  .::..|:|:|.|.....|.|..            || |||...|    |.|    |
 Worm   368 LNASQAAVRHYRNTLHRMEAPDWHPTAPTKSPTVQRWPLKPEFVE-SLSNAIVAKVQHVYCKVPV 431

  Fly   402 DC 403
            :|
 Worm   432 NC 433

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11127NP_610283.1 Glyco_tranf_GTA_type 223..>333 CDD:299700 31/164 (19%)
F54D10.8NP_494663.2 Glyco_transf_92 171..412 CDD:366762 52/262 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR21461
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.