DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11141 and p

DIOPT Version :10

Sequence 1:NP_610282.1 Gene:CG11141 / 35672 FlyBaseID:FBgn0033177 Length:710 Species:Drosophila melanogaster
Sequence 2:NP_649810.1 Gene:p / 41025 FlyBaseID:FBgn0086679 Length:826 Species:Drosophila melanogaster


Alignment Length:738 Identity:162/738 - (21%)
Similarity:265/738 - (35%) Gaps:176/738 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 LNLTCVDATEEFLAMGSDAGIVFWYNRHTGEMQKLKAEVATRITCVRVVNSVEYMVAAGCANGQV 100
            :..||.|.::.::..|:.:|.::.:||: |:...|.......||.:.:..:.:| ||.......:
  Fly    27 IKYTCFDISDSYIIFGASSGSLYLFNRN-GKFLLLIPNKHGAITSLSISANSKY-VAFATQRSLI 89

  Fly   101 SIFQIQKELPRDLDLVAPCTKSRPIERYTIRDLHKCVVSCCEWSKNGMKLYSGDRQGVVVLTEL- 164
            .::.:        :|.|..|   |...:|..| ....|:|..|:::..:.|.||.:|.|.|..| 
  Fly    90 CVYAV--------NLSAQAT---PQVIFTHLD-QSVQVTCIHWTQDEKQFYYGDSRGQVSLVLLS 142

  Fly   165 DYQAH---LSKSVE-ILSEAYEIVQLSVRQSYLLVATLYRCIVCQMDAQTSQWNITQVGKKDRKQ 225
            .:..|   .:.:|. :|.....|||:...:..|||:...:||:|    .|...:..|:|.:.|..
  Fly   143 SFIGHSLLFNMTVHPLLYLDSPIVQIDDFEYLLLVSNCTKCILC----NTEYEDYKQIGNRPRDG 203

  Fly   226 LIDCGA-IFLKKQEANKP-QLVCGRPGLRFWVADAAGNVSKTVIFRDAVLRSPTWEIPILNPKQR 288
            ..  || .|:..||:.:| ::.|.|||.|.|..|..|.|.:|..|:.|:..:|.        :.:
  Fly   204 AF--GACFFVSPQESLQPSRIYCARPGSRVWEVDFEGEVIQTHQFKTALATAPA--------RIQ 258

  Fly   289 SEPSGTHHTSASTSSTRHSGLADGDVGYVASSNFRQLYLYDGHDSLLVTHDDATLYVLNLDRLKV 353
            ...|||....|:..      |.|.....:..:..::|     :|..|:...:..||:.::.|..|
  Fly   259 RPGSGTDELDANAE------LLDYQPQNLQFAKVQRL-----NDDFLLAFTELGLYIFDIRRSAV 312

  Fly   354 EAVARGLRKILDFCVCGKEIFVLEGNRTLLRLAPLPEPPNKTAKVIFNPLMPPPVPVLGSHLSQL 418
            ...:....:|.|....|.||||...:..|..: .|....:....:|....:.|...:|..|:...
  Fly   313 VLWSNQFERIADCRSSGSEIFVFTQSGALYSV-QLQTLQSHAVSLIQQSKLLPCANLLRQHVRYF 376

  Fly   419 ESPIELQAEPVLQNAEECFELSPVEQLNLNVPIEIAVESPLTQ---QNRRLEIFRRI-------- 472
                       ...|.|.:||   :|||           ||.|   :.:..|:...|        
  Fly   377 -----------ADKAREDYEL---KQLN-----------PLKQLLIERQEYELLNDISVIFDAIT 416

  Fly   473 ----GEMDFEQ---SIVHTTRKTSVGKPPEASGVGIVEIGHETHELRLPLTNAATLMEASYCQME 530
                ..:|...   |...|.|..|.|....|...|:.                  ::|.::|   
  Fly   417 QCTGSALDTHSSGGSSATTERSLSGGSSSRAPPKGVY------------------VLENAFC--- 460

  Fly   531 NNGLASPLDMKAAFLQHLPDALSPTT--LQKTV--------AEKAKTLAAEL-----------DL 574
             :.|..||.     ..|..|||...|  ..|.:        ||:.:.|..||           |:
  Fly   461 -DNLKQPLK-----TGHFKDALLTVTGKFGKNIIKYKFNIFAEEQQQLVRELIPASERSLPFKDI 519

  Fly   575 PEVHLAPLSQEELHAVQ------AQTPQISDPLIRCYPTHLEEASIQTS-----SRENATNPADD 628
            ...:.:....:|...|:      .|.|.||......|..:|...|.:.|     .|..|.  .|:
  Fly   520 KARYESGSEDQEEEIVRRCKKPAPQVPHISPEEKTLYNLYLIAKSAKFSRTQCVDRYRAV--FDE 582

  Fly   629 YHVGEPVDGIRSFGVSKRKMAPLKFVLSQPKPTLKLEENRDDEEYTSFLPDFRRAGDPLAIHKET 693
            |..||.|:.:       .|:|.   |:.:...|....:....|.|..:|       ||..|.:..
  Fly   583 YAAGELVNLL-------EKLAQ---VMVEHGDTPDQAQRNCYEMYFDYL-------DPEMIWEVD 630

  Fly   694 PATSDS--------NTSSEWEFL 708
            .||.|.        |||...|.:
  Fly   631 DATRDHIAAGFVLLNTSQNAEIV 653

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11141NP_610282.1 WD40 repeat 138..188 CDD:293791 16/54 (30%)
WD40 repeat 194..228 CDD:293791 9/33 (27%)
pNP_649810.1 WD40 <20..148 CDD:441893 30/134 (22%)
WD40 repeat 25..63 CDD:293791 9/36 (25%)
WD40 repeat 68..107 CDD:293791 9/50 (18%)
WD40 repeat 116..154 CDD:293791 10/37 (27%)
WD40 repeat 161..196 CDD:293791 10/38 (26%)
WD40 repeat 204..245 CDD:293791 16/42 (38%)

Return to query results.
Submit another query.