DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11141 and HPS5

DIOPT Version :9

Sequence 1:NP_001286159.1 Gene:CG11141 / 35672 FlyBaseID:FBgn0033177 Length:710 Species:Drosophila melanogaster
Sequence 2:XP_011518164.1 Gene:HPS5 / 11234 HGNCID:17022 Length:1156 Species:Homo sapiens


Alignment Length:709 Identity:138/709 - (19%)
Similarity:247/709 - (34%) Gaps:214/709 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 ANLNLTCVDATEEFLAMGSDAGIVF------WYNR----HTGEMQKLKAEVATRITCVRVVNSVE 88
            :.|..|.:..:.::||:||..|.:.      |.:|    |       :....:::.|  .::..:
Human    33 SRLKCTSIAVSRKWLALGSSGGGLHLIQKEGWKHRLFLSH-------REGAISQVAC--CLHDDD 88

  Fly    89 YMVAAGCANGQVSIFQIQKELPRDLDLVAPCTKSRPIERYTIRDLHK--CVVSCCEWSKNGMKLY 151
            | ||...:.|.|.::::.:|           .:.:|.:.| :...||  .|.:.| |....::::
Human    89 Y-VAVATSQGLVVVWELNQE-----------RRGKPEQMY-VSSEHKGRRVTALC-WDTAILRVF 139

  Fly   152 SGDRQGVVVLTELDYQAHLSKSVEILSEAYE--------IVQLSVRQSYLLVATLYRCIVCQMDA 208
            .||..|.|...:|:.......:...:....:        :|||......||:::|.|..:|    
Human   140 VGDHAGKVSAIKLNTSKQAKAAAAFVMFPVQTITTVDSCVVQLDYLDGRLLISSLTRSFLC---- 200

  Fly   209 QTSQWNITQVGKKDRKQLIDCGAIFL--KKQEANKPQLVCGRPGLRFWVADAAGNVSKTVIFRDA 271
            .|.:....::|.|:|..  :.||.|.  :.....:|.:.|.|||.|.|..:..|.|..|..|:..
Human   201 DTEREKFWKIGNKERDG--EYGACFFPGRCSGGQQPLIYCARPGSRMWEVNFDGEVISTHQFKKL 263

  Fly   272 VLRSPTWEIPILNPKQRSEPSGTHHTSASTSSTRHSGLADGDVGYVASSNFRQLYLYDGHDSLLV 336
            :...|   :|::.  .||||. ..||:.|:.|.                :|.:|.....|  .::
Human   264 LSLPP---LPVIT--LRSEPQ-YDHTAGSSQSL----------------SFPKLLHLSEH--CVL 304

  Fly   337 THDDATLYVLNLDRLKVEAVARGLRKILDFCVCGKEIFVLEGNRTLLRLAPLPEPPNKTAKVIFN 401
            |..:..:|:.....::| .:...::.|.|..||..|:|.|..|                .||   
Human   305 TWTERGIYIFIPQNVQV-LLWSEVKDIQDVAVCRNELFCLHLN----------------GKV--- 349

  Fly   402 PLMPPPVPVLGSHLSQLESPIELQAEPVLQNAEECFELSPVEQLNLNVPIEIAVESPLTQQNRRL 466
                       ||||             |.:.|.|     ||:|.......:|..:....||   
Human   350 -----------SHLS-------------LISVERC-----VERLLRRGLWNLAARTCCLFQN--- 382

  Fly   467 EIFRRIGEMDFEQSIVHTTRKTSVGKPPEASGVGIVEIGHETH--------ELRL---PLTNAAT 520
                        ..|....|||......|...   .::.|.|:        ||.|   ||.:|  
Human   383 ------------SVIASRARKTLTADKLEHLK---SQLDHGTYNDLISQLEELILKFEPLDSA-- 430

  Fly   521 LMEASYCQMENNGLASPLDMKAAFLQHLPDALSPTTLQKTVAEKAKTLAAELDLPEVHLAPLSQE 585
                  |....:.::|          |...::..:.:.:.::.:..:.:.| |...:|...||::
Human   431 ------CSSRRSSISS----------HESFSILDSGIYRIISSRRGSQSDE-DSCSLHSQTLSED 478

  Fly   586 ELHAVQAQTPQISDPLIRCYPTH-----LEEASIQTSSRENATNPADDYHVGEPVDGIRSFGVSK 645
            | ...:..:.|..|...:|..:|     :..|.:...:.:|.|              ...||:  
Human   479 E-RFKEFTSQQEEDLPDQCCGSHGNEDNVSHAPVMFETDKNET--------------FLPFGI-- 526

  Fly   646 RKMAPLKFVLSQPKPTLKLEENRDDEEYTSFLPDFRRAGDPLAIHKETPATSDSNTSSE 704
                ||.|  ..|.|.:.|:..:  |..:||            :.|.|......:||.:
Human   527 ----PLPF--RSPSPLVSLQAVK--ESVSSF------------VRKTTEKIGTLHTSPD 565

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11141NP_001286159.1 WD40 repeat 138..188 CDD:293791 10/57 (18%)
WD40 repeat 194..228 CDD:293791 8/33 (24%)
HPS5XP_011518164.1 WD40 repeat 37..75 CDD:293791 9/44 (20%)
WD40 repeat 81..118 CDD:293791 9/51 (18%)
WD40 repeat 126..165 CDD:293791 8/39 (21%)
WD40 repeat 173..210 CDD:293791 9/40 (23%)
WD40 repeat 218..257 CDD:293791 12/38 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3621
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4159
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
43.800

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