DRSC/TRiP Functional Genomics Resources

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Protein Alignment fa2h and Fa2h

DIOPT Version :9

Sequence 1:NP_610279.3 Gene:fa2h / 35670 FlyBaseID:FBgn0050502 Length:355 Species:Drosophila melanogaster
Sequence 2:NP_001129055.1 Gene:Fa2h / 307855 RGDID:1310347 Length:372 Species:Rattus norvegicus


Alignment Length:347 Identity:131/347 - (37%)
Similarity:194/347 - (55%) Gaps:46/347 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 YDLSRFMHKHPGGINTLKGLNSGDMTARFLKAPP--HSDAA-----MYLMREYKIDPEDSRKPKS 83
            |||:.|:..||||...|......|::|. |..||  |||.|     .|.:.|.:.||:|.     
  Rat    34 YDLTGFVRHHPGGEQLLLARAGQDISAD-LDGPPHKHSDNARRWLEQYYVGELRADPQDP----- 92

  Fly    84 SQRETLHHDEDGTLRQRPRETEDKN-----NNQVDDSMEHLVDWSKAMLPQIANITDCYDEWVHK 143
                    .|:|.  ..|.||:..:     ..:|.|..:.||||.|.:|.|:.::.:.||||||:
  Rat    93 --------TENGA--GAPAETQKTDAAIEPQFKVVDWDKDLVDWQKPLLWQVGHLGEKYDEWVHQ 147

  Fly   144 PVDRPLRLFDPWYLEMCTKTPWWLVPLFWIPVIVKCAVEEFTTAWQDSNQL-------------- 194
            ||.||:|||....:|..:||.|:.||:.|:|:::..:...:.|..||:.:|              
  Rat   148 PVARPIRLFHSDLIEAFSKTVWYSVPIIWVPLVLYLSWSYYRTLTQDNIRLFASFTRDYSLVVPE 212

  Fly   195 AVFSGYFLFGVLLWSFLEYTLHRWVFHVKLSNKSGSWLCTFHFMIHGLHHKVPFDPMRLVFPPLP 259
            :||.|.|:.|:|:|:.:||.:||::||:|..:.| .:|...||::||.|||.|||..||||||:|
  Rat   213 SVFIGLFVLGMLIWTLVEYLIHRFLFHMKPPSNS-HYLIMLHFVMHGQHHKAPFDGSRLVFPPVP 276

  Fly   260 GAVLAAVIYTPLSFVLSH--PRVILSGALAGYLCYDMMHYYLHYGNPSLWAFVH-MKRYHHHHHF 321
            .:|:.|..|..|..:|..  ..::.:|.|.||:.|||.|||||:|:|...:::: ||.:|..|||
  Rat   277 ASVVVAFFYVFLRLILPEAVAGILFAGGLLGYVLYDMTHYYLHFGSPHKGSYLYNMKAHHVKHHF 341

  Fly   322 SHQTLGYGISSPLWDVVFKTRI 343
            .:|..|:|||:.|||..|.|.|
  Rat   342 EYQKSGFGISTKLWDYFFHTLI 363

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fa2hNP_610279.3 Cyt-b5 6..73 CDD:278597 20/53 (38%)
FA_hydroxylase 117..341 CDD:294712 99/240 (41%)
Fa2hNP_001129055.1 Cyt-b5 12..86 CDD:395121 20/52 (38%)
FA_hydroxylase 124..372 CDD:412761 100/241 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166341758
Domainoid 1 1.000 143 1.000 Domainoid score I4521
eggNOG 1 0.900 - - E1_COG3000
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H56284
Inparanoid 1 1.050 231 1.000 Inparanoid score I3364
OMA 1 1.010 - - QHG55743
OrthoDB 1 1.010 - - D1049908at2759
OrthoFinder 1 1.000 - - FOG0004076
OrthoInspector 1 1.000 - - oto97813
orthoMCL 1 0.900 - - OOG6_103477
Panther 1 1.100 - - LDO PTHR12863
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X2828
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1615.770

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