DRSC/TRiP Functional Genomics Resources

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Protein Alignment fa2h and Sc5d

DIOPT Version :9

Sequence 1:NP_610279.3 Gene:fa2h / 35670 FlyBaseID:FBgn0050502 Length:355 Species:Drosophila melanogaster
Sequence 2:NP_766357.1 Gene:Sc5d / 235293 MGIID:1353611 Length:299 Species:Mus musculus


Alignment Length:188 Identity:49/188 - (26%)
Similarity:73/188 - (38%) Gaps:39/188 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   164 PWWLVP---LFWIPV----IVKCAVEEFTTAWQDSNQLAVFSGYFLFGVLLWSFLEYTLHRWVFH 221
            ||..:|   ||.:.:    .:...:.:|...|   ..|.|....|||   ....|.|.:||.:.|
Mouse    85 PWISIPTVSLFLLELRGYSKLYDDIGDFPNGW---IHLMVSVVSFLF---FTDMLIYWIHRGLHH 143

  Fly   222 VKLSNKSGSWLCTFHFMIHGLHH--KVPFDPMRLVFPPLPGAVLAAVIYTPLSFVLSHPRVILSG 284
             :|..|          .||..||  |:|.......|.|:.| .|.::.|....||....:|:..|
Mouse   144 -RLVYK----------RIHKPHHIWKIPTPFASHAFHPVDG-FLQSLPYHIYPFVFPLHKVVYLG 196

  Fly   285 ALAGYLCYDMMHYYLHYGN---PS-LWAFVHMKRYH--HHHHFSHQTLGYGISSPLWD 336
            .   |:..::....:|.|:   |. |..|::...:|  ||..|.:   .||....|||
Mouse   197 L---YVLVNVWTISIHDGDFRVPQILRPFINGSAHHTDHHMFFDY---NYGQYFTLWD 248

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fa2hNP_610279.3 Cyt-b5 6..73 CDD:278597
FA_hydroxylase 117..341 CDD:294712 49/188 (26%)
Sc5dNP_766357.1 ERG3 40..257 CDD:225546 49/188 (26%)
Histidine box-1 138..143 2/4 (50%)
Histidine box-2 151..155 1/3 (33%)
Histidine box-3 228..233 1/4 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 280..299
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3000
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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