DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment kappaB-Ras and rit1

DIOPT Version :10

Sequence 1:NP_610278.1 Gene:kappaB-Ras / 35667 FlyBaseID:FBgn0040513 Length:201 Species:Drosophila melanogaster
Sequence 2:NP_001122253.1 Gene:rit1 / 793942 ZFINID:ZDB-GENE-070912-329 Length:211 Species:Danio rerio


Alignment Length:208 Identity:56/208 - (26%)
Similarity:89/208 - (42%) Gaps:30/208 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 KVLVCGMKGVGKTALIEQLVYGHVNPETELHPTIEDIYVASVDTGRGGARETLRIYDTAGLQGEQ 75
            |:::.|..||||:|:|.|.: .|..|| :..|||||.|...:......|  .|.|.|||| |.|.
Zfish    15 KLVMLGEGGVGKSAIIMQFI-SHRFPE-DHDPTIEDAYKTQIRIDDEPA--NLDILDTAG-QAEF 74

  Fly    76 QQLPRHYLQFPDAFVLVYDPMDPRSLDMLADIKADIEKHKEKKEIPVVVLAN----VRARAAPNP 136
            ..:...|::..:.|::.|...|.||.......|..|.:.:...:.|||::.|    |..|..  .
Zfish    75 TAMRDQYMRAGEGFIISYSITDRRSFQEARHFKQLIYRVRRTVDTPVVLVGNKSDLVHLRQV--S 137

  Fly   137 VEKVMDRANIWCQRE-RIKHYTVNAMERPSLYEPFTTLCARLHPMQTK-------------STFP 187
            ||:....|     || :...:..:|..|..:.|.|..|..::...:.:             |.:.
Zfish   138 VEEGKQLA-----REFQCPFFETSAAFRYYIDEVFAALVRQIRQHEAEMVRDSERKTRRSHSFWS 197

  Fly   188 QLRQVMQNRQKSE 200
            :|:.....:|:||
Zfish   198 RLKAPFHRKQQSE 210

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kappaB-RasNP_610278.1 Ras_like_GTPase 13..174 CDD:206648 49/165 (30%)
rit1NP_001122253.1 P-loop containing Nucleoside Triphosphate Hydrolases 12..180 CDD:476819 51/176 (29%)

Return to query results.
Submit another query.