DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sPLA2 and Oc90

DIOPT Version :9

Sequence 1:NP_001014501.1 Gene:sPLA2 / 35665 FlyBaseID:FBgn0033170 Length:186 Species:Drosophila melanogaster
Sequence 2:NP_001128237.1 Gene:Oc90 / 690625 RGDID:1593441 Length:539 Species:Rattus norvegicus


Alignment Length:80 Identity:21/80 - (26%)
Similarity:30/80 - (37%) Gaps:22/80 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 WCGPGNTAANFEDLGRERET-DKCCRAHDHCDEIIESHGALHGLPTNT--------------DWF 99
            :||.       |..|..|:| |:||.:|..|.|.:...|.|||..:.:              ...
  Rat   392 YCGR-------EGRGVPRDTLDRCCLSHHCCLEQMRQLGCLHGRHSRSSVVCEHHTPKCVGQSLC 449

  Fly   100 PILKCTCEQQFINCL 114
            ..|.|.|:|....|:
  Rat   450 EKLLCACDQMAAECM 464

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sPLA2NP_001014501.1 PLA2_bee_venom_like 43..139 CDD:153093 21/80 (26%)
Oc90NP_001128237.1 otoconin_90 129..246 CDD:153096
otoconin_90 371..485 CDD:153096 21/80 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1422829at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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