DRSC/TRiP Functional Genomics Resources

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Protein Alignment sPLA2 and Pla2g2a

DIOPT Version :9

Sequence 1:NP_001014501.1 Gene:sPLA2 / 35665 FlyBaseID:FBgn0033170 Length:186 Species:Drosophila melanogaster
Sequence 2:NP_113786.3 Gene:Pla2g2a / 29692 RGDID:620857 Length:146 Species:Rattus norvegicus


Alignment Length:142 Identity:31/142 - (21%)
Similarity:42/142 - (29%) Gaps:66/142 - (46%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 CGPGNTAANFEDLGR---ERETDKCCRAHDHCDEIIESHGALHGLPTNTDWFPILKCTCEQQFIN 112
            ||.|         ||   :..||.||..||.|...:|..|                  |..:|: 
  Rat    49 CGVG---------GRGSPKDATDWCCVTHDCCYNRLEKRG------------------CGTKFL- 85

  Fly   113 CLQAVNSITAKTLGRIYYGSRSRCFANGHPTTGCKQYQEGTFRKRCIRYQVDKSKAKV------- 170
                       |....|.|.:..|..|          |:...::.|   |.||:.|:.       
  Rat    86 -----------TYKFSYRGGQISCSTN----------QDSCRKQLC---QCDKAAAECFARNKKS 126

  Fly   171 ----WQFYDMPF 178
                :|||...|
  Rat   127 YSLKYQFYPNKF 138

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sPLA2NP_001014501.1 PLA2_bee_venom_like 43..139 CDD:153093 20/90 (22%)
Pla2g2aNP_113786.3 PA2c 22..139 CDD:214508 31/142 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1422829at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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