DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sPLA2 and Pla2g5

DIOPT Version :9

Sequence 1:NP_001014501.1 Gene:sPLA2 / 35665 FlyBaseID:FBgn0033170 Length:186 Species:Drosophila melanogaster
Sequence 2:NP_058870.1 Gene:Pla2g5 / 29354 RGDID:62051 Length:137 Species:Rattus norvegicus


Alignment Length:80 Identity:20/80 - (25%)
Similarity:35/80 - (43%) Gaps:21/80 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 WCGPGNTAANFEDLGRERE-TDKCCRAHDHCDEII-ESHGALHG------------LPTNTDWFP 100
            :||.|..       |..:: ||.|||.||.|..:: |.|.|:..            :..:..:.|
  Rat    47 YCGWGGH-------GTPKDGTDWCCRMHDRCYGLLEEKHCAIRTQSYDYRFTQDLVICEHDSFCP 104

  Fly   101 ILKCTCEQQFINCLQ 115
            :..|.|:::.:.||:
  Rat   105 VRLCACDRKLVYCLR 119

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sPLA2NP_001014501.1 PLA2_bee_venom_like 43..139 CDD:153093 20/80 (25%)
Pla2g5NP_058870.1 PA2c 22..137 CDD:214508 20/80 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1422829at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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