DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11123 and nop9

DIOPT Version :9

Sequence 1:NP_610276.1 Gene:CG11123 / 35664 FlyBaseID:FBgn0033169 Length:665 Species:Drosophila melanogaster
Sequence 2:NP_001121503.1 Gene:nop9 / 100158615 XenbaseID:XB-GENE-5918855 Length:623 Species:Xenopus tropicalis


Alignment Length:685 Identity:169/685 - (24%)
Similarity:283/685 - (41%) Gaps:112/685 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 EGDSRRKRPKKKGNRFMRNAKGFAKQGIFGRGTHIDDEQFNYFINILDAMKVGFEDVEERVIMAN 68
            ||.:..|:.:|............|.|.:  :...:|.:...||..:.:.::..||..||:.|...
 Frog    25 EGSTPAKKQRKGAEPLPTQEGKKAPQEL--QIPRLDPKSVGYFRRVGETLQQPFESDEEKGIFIR 87

  Fly    69 NVFEQTHDQEIHLASNQIVSKALESLVGFVDDVQLERFFSKFGDNLRPMCSDRFASHVLQKMLEI 133
            |||.:....|:.||::...|..|:.|:.....|||.|..:......:.:|..|..:||:|..| :
 Frog    88 NVFHEVQGNELPLATDMSGSLVLQKLLAVATSVQLCRVVAALSKQWQAVCCHRSGAHVVQTAL-L 151

  Fly   134 AFLRGVGKSAAQDTSDAASANKKAKPDAAQEEEEYNLQADFTDDHREKCRQFVLRISKFMLNNLE 198
            .|.| :.|....:..:......:|:|....|:....|.|:..              .||:|.|. 
 Frog   152 QFPR-LQKQQGAEEEEETEEEGEAEPVGTLEDLVLGLCAELK--------------GKFLLYNK- 200

  Fly   199 DFVWDACASHIMRTAILCLVGMHVPKIAFEKGGTEIA-----KHRKMYSVPDEWQEVMKEFPQRL 258
                |...|.|:||....|            |||.::     |..|..:|..|: ||.:.|..:|
 Frog   201 ----DTHGSFIVRTLFQVL------------GGTVLSQDTGRKAAKGPTVASEF-EVPESFLHQL 248

  Fly   259 -EMWPQFGDF--PYQDHSSSLLGVICLALSVVDKSMLKHFAKKI-LTIGLLKSSDEDEEKMELDT 319
             |:...|||.  .:..|..:.|| :.:||.|:.:.|....|:.. ..|..|.|.:...|...|  
 Frog   249 QELCGCFGDHVGVFATHKVASLG-MQVALRVLQRKMPPVCAQLCDQMIEYLASRNVSAESSSL-- 310

  Fly   320 KIEIKDEDDDNDEKEDKKAKEADADTENKQEEPKLPKVFHHQSSVILLETIMSVAGAKLMIQLYA 384
            .:.:|||                                   :|..|||.|:.|:..|.:.:::.
 Frog   311 LVFLKDE-----------------------------------TSSRLLERILEVSEKKQLRRVFK 340

  Fly   385 MLFCNRIGYLARQPGTNFSVQRLLQHIKEVPDFESVFTELQPHVEELLKMGYTGVVSALSAACLR 449
            ..|..::..||..|..|::|||||..::....|..:|.||.|.:|:.|..|:.|:::.|:..|.|
 Frog   341 AHFQGQLRALAAHPIANYTVQRLLSAVQTKKLFAVLFDELSPGLEDALAKGHMGIITTLADTCKR 405

  Fly   450 LATKQSQMIAALQSALHVSGDKEKSKLFLTCLIKLKPFEVVTGDES---------------AFVH 499
            |..:|.::::.|..|.|.:....:....:...:.|..:||....|.               ..|:
 Frog   406 LKCRQRELLSQLMEAFHCAAPLSRQVASIPLFLSLLTYEVYYNKEEEEEPSEHQGDADRKLENVN 470

  Fly   500 LHGSLITQHLLQFNKPIFLVNCILDLPATQLAQVFNTPNGSHIVDAFMQSKFIGEKSRERLIRQL 564
            .||||:.||||.|..|...:..:..|....|..|..:..|.|::|:.:.|..|.:|.|::::|:|
 Frog   471 YHGSLLVQHLLHFEDPSVALKSLGSLTDADLLTVACSQAGCHVLDSLLGSATISDKQRKKILRRL 535

  Fly   565 DGFYVDLAITRHGSRVFEQCFKAAQDAQKLRMAKELFSKANMLKGSPHGRIIYTKYRLDTYKLSP 629
            .|..:.||..::||||.::.:.|:....|..:|::|..|.:.|:..|.|..|...:.|..:....
 Frog   536 RGHCMQLACNKYGSRVLDRMWTASTLGVKEEIAQQLVEKLHQLQNDPVGHHIARNFALTHFVKRR 600

  Fly   630 TQWQESLSKHLDAEQTKETKRKTAKTAVEAFKDIL 664
            ..|:|        .|..|.||:      :.|.:||
 Frog   601 KDWEE--------HQLGENKRR------KMFSEIL 621

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11123NP_610276.1 Pumilio 112..>134 CDD:214475 6/21 (29%)
nop9NP_001121503.1 Pumilio 73..>154 CDD:356422 24/81 (30%)
Pumilio <469..>587 CDD:356422 38/117 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H41678
Inparanoid 1 1.050 159 1.000 Inparanoid score I4158
OMA 1 1.010 - - QHG55585
OrthoDB 1 1.010 - - D238378at2759
OrthoFinder 1 1.000 - - FOG0003776
OrthoInspector 1 1.000 - - oto105235
Panther 1 1.100 - - LDO PTHR13102
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R832
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1010.110

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