Protein Alignment so and STM

DIOPT Version :9

• Sequence 1: NP_476733.1
• Gene: so / 35662
• FlyBaseID: FBgn0003460
• Length: 416
• Species: Drosophila melanogaster
• Sequence 2: NP_176426.1
• Gene: STM / 842534
• AraportID: AT1G62360
• Length: 382
• Species: Arabidopsis thaliana
• Alignment Length: 304
• Identity: 77/304 - (25%)
• Similarity: 117/304 - (38%)
• Gaps: 75/304 - (24%)

  Fly    31 PTGLSGSVALHNNNNNNSSTSNNNNSTLDIMAHNGGGAGGGLHLNSSSNGGGGGGVVSGGGSGGR 95
            |.|....||    ::::.|:.....|.::| .||...|||....:|||:.......:.......|
plant    74 PQGTKNKVA----SSSSPSSCAPAYSLMEI-HHNEIVAGGINPCSSSSSSASVKAKIMAHPHYHR 133

  Fly    96 -----ENLPSFGFTQEQVACVCEVLQQA-------------GNIERLGRFLWSLPQCDKLQLNES 142
                 .|....|...|.||.:.|....|             |....|.:|:.:  .|:.|...|.
plant   134 LLAAYVNCQKVGAPPEVVARLEEACSSAAAAAASMGPTGCLGEDPGLDQFMEA--YCEMLVKYEQ 196

  Fly   143 VLK---AKAVVAFHR--GQYKELYRLLEHHHFSA---------QNHAKLQALWLKAHYV----EA 189
            .|.   .:|:|...|  .|:|.| .|.....||.         .|.:..:.:.:...:|    |.
plant   197 ELSKPFKEAMVFLQRVECQFKSL-SLSSPSSFSGYGETAIDRNNNGSSEEEVDMNNEFVDPQAED 260

  Fly   190 EKLRGRPLGAVGKY---------RVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYSHN---PY 242
            .:|:|:.|.....|         :.|:|..||:              ::|..|.||:|.:   ||
plant   261 RELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPK--------------EARQQLLDWWSRHYKWPY 311

  Fly   243 PSPREKRDLAEATGLTTTQVSNWFKNRRQRDRAAEHKDGSTDKQ 286
            ||.::|..|||:|||...|::|||.|:|:|     |...|.|.|
plant   312 PSEQQKLALAESTGLDQKQINNWFINQRKR-----HWKPSEDMQ 350

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
so	NP_476733.1	SIX1_SD	103..212	CDD:293483	30/148 (20%)
		homeodomain	223..274	CDD:238039	23/53 (43%)
STM	NP_176426.1	KNOX1	121..156	CDD:397730	6/34 (18%)
		KNOX2	173..216	CDD:397731	10/44 (23%)
		ELK	262..283	CDD:397729	4/20 (20%)
		Homeobox_KN	302..341	CDD:399131	19/38 (50%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	78	1.000	Inparanoid score	I2393
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	1.050