Protein Alignment so and six5

DIOPT Version :9

• Sequence 1: NP_476733.1
• Gene: so / 35662
• FlyBaseID: FBgn0003460
• Length: 416
• Species: Drosophila melanogaster
• Sequence 2: NP_571795.1
• Gene: six5 / 65235
• ZFINID: ZDB-GENE-010201-3
• Length: 797
• Species: Danio rerio
• Alignment Length: 303
• Identity: 134/303 - (44%)
• Similarity: 180/303 - (59%)
• Gaps: 33/303 - (10%)

  Fly   100 SFGFTQEQVACVCEVLQQAGNIERLGRFLWSL-PQCDKLQLNESVLKAKAVVAFHRGQYKELYRL 163
            :..|:.:||||:||.|.||||::||.|||.:: |..|.|:.||::|||:|:|||||.::||||.:
Zfish    47 ALSFSTDQVACLCEALLQAGNVDRLWRFLATIPPSADLLRGNETLLKAQALVAFHRDEFKELYAI 111

  Fly   164 LEHHHFSAQNHAKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEK 228
            |:.|.|...||..||.|:|||.|.|||:.|||.||||.|||:|:|||||:||||||||.||||||
Zfish   112 LDSHDFHPSNHGFLQDLYLKARYKEAERSRGRSLGAVDKYRLRKKFPLPKTIWDGEETVYCFKEK 176

  Fly   229 SRSVLRDWYSHNPYPSPREKRDLAEATGLTTTQVSNWFKNRRQRDRAAEHKDGSTDKQHLDSSSD 293
            ||:.|::.|..|.||:|.||::||:.|||:.|||||||||||||||.   ..|:..|...|.:..
Zfish   177 SRNALKECYKINRYPTPAEKKNLAKVTGLSLTQVSNWFKNRRQRDRT---PSGTNSKSESDGNHS 238

  Fly   294 SEMEGSMLPSQSAQHQQQQQQQQHS-------PGNSSGNNNGLHQQQLQHVAAEQGLQHHP---- 347
            :|.|.|....:....:...|:...|       ||...|..              |.:.:.|
Zfish   239 TEDEASKGDLEDITDKPAAQETGSSNASLISVPGAPCGTG--------------QLVLNSPGGFL 289

  Fly   348 HQPHPASNIANVAATKSSGGGGG--GGVSAAAAAQMQMPPLTA 388
            ..|||.  :.|.:...|..|.|.  .|::.:....:.:.|:||
Zfish   290 TSPHPL--LLNGSPILSGAGTGVIINGLTLSDGHTVTLSPVTA 330

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
so	NP_476733.1	SIX1_SD	103..212	CDD:293483	64/109 (59%)
		homeodomain	223..274	CDD:238039	34/50 (68%)
six5	NP_571795.1	SIX1_SD	50..160	CDD:293483	64/109 (59%)
		homeodomain	171..222	CDD:238039	34/50 (68%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG0775
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	2	1.810