Protein Alignment so and six1b

DIOPT Version :10

• Sequence 1: NP_476733.1
• Gene: so / 35662
• FlyBaseID: FBgn0003460
• Length: 416
• Species: Drosophila melanogaster
• Sequence 2: NP_996978.1
• Gene: six1b / 404627
• ZFINID: ZDB-GENE-040426-2308
• Length: 284
• Species: Danio rerio
• Alignment Length: 268
• Identity: 179/268 - (66%)
• Similarity: 202/268 - (75%)
• Gaps: 21/268 - (7%)

  Fly    98 LPSFGFTQEQVACVCEVLQQAGNIERLGRFLWSLPQCDKLQLNESVLKAKAVVAFHRGQYKELYR 162
            ||||||||||||||||||||.||:|||||||||||.||.|..||||||||||||||||.::|||:
Zfish     4 LPSFGFTQEQVACVCEVLQQGGNLERLGRFLWSLPACDHLHKNESVLKAKAVVAFHRGNFRELYK 68

  Fly   163 LLEHHHFSAQNHAKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKE 227
            :||.|.||..||.|||.|||||||:||||||||||||||||||||||||||||||||||||||||
Zfish    69 ILESHQFSPHNHPKLQQLWLKAHYIEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKE 133

  Fly   228 KSRSVLRDWYSHNPYPSPREKRDLAEATGLTTTQVSNWFKNRRQRDRAAEHKDGSTDKQHLDSSS 292
            |||.|||:||:|||||||||||:|||||||||||||||||||||||||||.|:....:.:...::
Zfish   134 KSRGVLREWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEAKERENSENNNTGAN 198

  Fly   293 D----SEMEG--SMLPSQSAQHQQQQQQQQHS----------PGNSSGNNNGLHQQQLQHVAAEQ 341
            .    |.::|  |::.|...:....|...|:|          ||.|:.:..||...|..|
Zfish   199 KQNQLSPLDGGKSLMSSSEDEFSPPQSPDQNSVLLLQGNMSHPGASAYSMTGLGAAQSVH----- 258

  Fly   342 GLQHHPHQ 349
            |:|.||||
Zfish   259 GMQGHPHQ 266

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
so	NP_476733.1	SIX1_SD	103..212	CDD:465293	90/108 (83%)
		homeodomain	223..274	CDD:238039	46/50 (92%)
six1b	NP_996978.1	SIX1_SD	9..118	CDD:465293	90/108 (83%)
		homeodomain	129..180	CDD:238039	46/50 (92%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	167..238		25/70 (36%)