Protein Alignment so and six3a

DIOPT Version :9

• Sequence 1: NP_476733.1
• Gene: so / 35662
• FlyBaseID: FBgn0003460
• Length: 416
• Species: Drosophila melanogaster
• Sequence 2: NP_571437.1
• Gene: six3a / 30635
• ZFINID: ZDB-GENE-990415-127
• Length: 294
• Species: Danio rerio
• Alignment Length: 220
• Identity: 127/220 - (57%)
• Similarity: 165/220 - (75%)
• Gaps: 11/220 - (5%)

  Fly    98 LPSFGFTQEQVACVCEVLQQAGNIERLGRFLWSLP----QCDKLQLNESVLKAKAVVAFHRGQYK 158
            ||:..|:.||||.|||.|::.|:||||||||||||    .|:.:..:||:|:|:||||||.|.::
Zfish    44 LPTLNFSPEQVASVCETLEETGDIERLGRFLWSLPVAPGACEAINKHESILRARAVVAFHTGNFR 108

  Fly   159 ELYRLLEHHHFSAQNHAKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETSY 223
            :||.:||:|.|:..:|.||||:||:|||.|||||||||||.|.|||||:||||||||||||:.::
Zfish   109 DLYHILENHKFTKDSHGKLQAMWLEAHYQEAEKLRGRPLGPVDKYRVRKKFPLPRTIWDGEQKTH 173

  Fly   224 CFKEKSRSVLRDWYSHNPYPSPREKRDLAEATGLTTTQVSNWFKNRRQRDRAAEHKD-------G 281
            ||||::||:||:||..:|||:|.:||:||:|||||.|||.|||||||||||||..|:       |
Zfish   174 CFKERTRSLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKNRRQRDRAAAAKNRLQHQAIG 238

  Fly   282 STDKQHLDSSSDSEMEGSMLPSQSA 306
            ....:.|..|..:....:..||.:|
Zfish   239 QNGMRSLSESGCAPRSSAESPSTAA 263

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
so	NP_476733.1	SIX1_SD	103..212	CDD:293483	70/112 (63%)
		homeodomain	223..274	CDD:238039	35/50 (70%)
six3a	NP_571437.1	SIX1_SD	49..162	CDD:293483	70/112 (63%)
		homeodomain	170..218	CDD:238039	29/47 (62%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG0775
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X333
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	3	2.810