Protein Alignment so and Six3

DIOPT Version :9

• Sequence 1: NP_476733.1
• Gene: so / 35662
• FlyBaseID: FBgn0003460
• Length: 416
• Species: Drosophila melanogaster
• Sequence 2: XP_017172856.1
• Gene: Six3 / 20473
• MGIID: 102764
• Length: 354
• Species: Mus musculus
• Alignment Length: 231
• Identity: 139/231 - (60%)
• Similarity: 177/231 - (76%)
• Gaps: 18/231 - (7%)

  Fly    65 GGGAGGGLHLNSSSNGGGGGGVVSGGGSGGREN-----------LPSFGFTQEQVACVCEVLQQA 118
            |||||||...|.:..||.||   :||||||..:           ||:..|:.||||.|||.|::.
Mouse    63 GGGAGGGGGGNRAGGGGAGG---AGGGSGGGGSRAPPEELSMFQLPTLNFSPEQVASVCETLEET 124

  Fly   119 GNIERLGRFLWSLP----QCDKLQLNESVLKAKAVVAFHRGQYKELYRLLEHHHFSAQNHAKLQA 179
            |:||||||||||||    .|:.:..:||:|:|:||||||.|.:::||.:||:|.|:.::|.||||
Mouse   125 GDIERLGRFLWSLPVAPGACEAINKHESILRARAVVAFHTGNFRDLYHILENHKFTKESHGKLQA 189

  Fly   180 LWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYSHNPYPS 244
            :||:|||.|||||||||||.|.|||||:||||||||||||:.::||||::||:||:||..:|||:
Mouse   190 MWLEAHYQEAEKLRGRPLGPVDKYRVRKKFPLPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPN 254

  Fly   245 PREKRDLAEATGLTTTQVSNWFKNRRQRDRAAEHKD 280
            |.:||:||:|||||.|||.|||||||||||||..|:
Mouse   255 PSKKRELAQATGLTPTQVGNWFKNRRQRDRAAAAKN 290

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
so	NP_476733.1	SIX1_SD	103..212	CDD:293483	70/112 (63%)
		homeodomain	223..274	CDD:238039	35/50 (70%)
Six3	XP_017172856.1	SIX1_SD	109..222	CDD:374862	70/112 (63%)
		homeodomain	230..278	CDD:238039	29/47 (62%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG0775
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X333
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	3	2.810