Protein Alignment so and unc-39

DIOPT Version :9

• Sequence 1: NP_476733.1
• Gene: so / 35662
• FlyBaseID: FBgn0003460
• Length: 416
• Species: Drosophila melanogaster
• Sequence 2: NP_506563.2
• Gene: unc-39 / 191623
• WormBaseID: WBGene00006775
• Length: 335
• Species: Caenorhabditis elegans
• Alignment Length: 336
• Identity: 106/336 - (31%)
• Similarity: 159/336 - (47%)
• Gaps: 72/336 - (21%)

  Fly     1 MLQHPATD---FYDLAAANAAAVLTARHTPPYSPTGLSGSVALHNNNNNNSSTSNNNNSTLDIMA 62
            |..||..|   ::|         ...:|..|...|..|.|    |:|.:|||||.:
 Worm     1 MTDHPPIDTSSYFD---------CYQQHQLPLQYTFTSSS----NSNTSNSSTSPS--------- 43

  Fly    63 HNGGGAGGGLHLNSSSNGGGG------------GGVVS------GGGSGGRENLPSFG-----FT 104
                      |::...:..||            ..|:.      ...|.....:|:||     ::
 Worm    44 ----------HISDQFSSSGGPPYELSSHILTPSSVIPTPSPSVASASISSPTIPAFGCTMSEYS 98

  Fly   105 QEQVACVCEVLQQAGNIERLGRF------LWSLPQCDKLQLNESVLKAKAVVAFHRGQYKELYRL 163
            .||:..:...|.||.:.:||..|      |:.....|.|: :|:::.|.....:|..:::.|:.|
 Worm    99 MEQMEAISTSLFQARDGDRLVAFFKQLESLYGPNAVDHLR-SEAIIVAYTYALYHSNEFETLFHL 162

  Fly   164 LEHHHFSAQNHAKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEK 228
            |.:.||..:::..||.:|..|.|.|::..||:.|..|.|||:|||||.|:|||||||..|.||:.
 Worm   163 LSNRHFQQRHYNDLQDIWHHARYKESQLKRGKELNPVEKYRLRRKFPAPKTIWDGEEIVYSFKDS 227

  Fly   229 SRSVLRDWYSH-NPYPSPREKRDLAEATGLTTTQVSNWFKNRRQRDRAAEHKDGSTDKQHLDSSS 292
            ||..|:.::.: :.||:..:||:::.||||...|:|||||||||||     |..::.|....|||
 Worm   228 SRKFLKQFFRNVSEYPTQEQKREISRATGLKIVQISNWFKNRRQRD-----KSNNSAKCSPPSSS 287

  Fly   293 DSEMEGS-MLP 302
            .|...|| .||
 Worm   288 SSTNGGSDFLP 298

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
so	NP_476733.1	SIX1_SD	103..212	CDD:293483	37/114 (32%)
		homeodomain	223..274	CDD:238039	25/51 (49%)
unc-39	NP_506563.2	SIX1_SD	97..211	CDD:293483	37/114 (32%)
		homeodomain	222..277	CDD:238039	27/59 (46%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG0775
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.810