Protein Alignment so and ceh-34

DIOPT Version :10

• Sequence 1: NP_476733.1
• Gene: so / 35662
• FlyBaseID: FBgn0003460
• Length: 416
• Species: Drosophila melanogaster
• Sequence 2: NP_504419.1
• Gene: ceh-34 / 178919
• WormBaseID: WBGene00000455
• Length: 256
• Species: Caenorhabditis elegans
• Alignment Length: 201
• Identity: 106/201 - (52%)
• Similarity: 137/201 - (68%)
• Gaps: 12/201 - (5%)

  Fly   103 FTQEQVACVCEVL----QQAGNIERLGRFLWSLPQCDKLQLNESVLKAKAVVAFHRGQYKELYRL 163
            ::::::.|:||.|    .|.|..|:|..|:::||||  .|:.||||||:|:|.|....:|.||:|
 Worm    17 YSEQEIVCICESLFNEGLQTGRTEQLANFIYNLPQC--YQVMESVLKAQALVYFTTQNWKMLYKL 79

  Fly   164 LEHHHFSAQNHAKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEK 228
            ||...||..||..||.|||.|||.||.|.:.|.||||.|||:|:|.|.|.||||||||:||||.|
 Worm    80 LECSKFSPHNHTVLQNLWLDAHYKEAAKTKDRELGAVCKYRIRKKNPFPNTIWDGEETNYCFKSK 144

  Fly   229 SRSVLRDWYSHNPYPSPREKRDLAEATGLTTTQVSNWFKNRRQRDRAAEHKDGSTDKQHLDSSSD 293
            ||:||||.|....|||..:||.||:.|.|:..||||||||:|||:|||...|.|:.:     |:|
 Worm   145 SRNVLRDAYKKCQYPSVEDKRRLAQQTELSIIQVSNWFKNKRQRERAAGQLDRSSAR-----SND 204

  Fly   294 SEMEGS 299
            |: :||
 Worm   205 SD-DGS 209

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
so	NP_476733.1	SIX1_SD	103..212	CDD:465293	55/112 (49%)
		homeodomain	223..274	CDD:238039	32/50 (64%)
ceh-34	NP_504419.1	SIX1_SD	17..128	CDD:465293	55/112 (49%)
		homeodomain	139..190	CDD:238039	32/50 (64%)