Protein Alignment so and six3

DIOPT Version :9

• Sequence 1: NP_476733.1
• Gene: so / 35662
• FlyBaseID: FBgn0003460
• Length: 416
• Species: Drosophila melanogaster
• Sequence 2: XP_002944388.2
• Gene: six3 / 100493798
• XenbaseID: XB-GENE-478761
• Length: 295
• Species: Xenopus tropicalis
• Alignment Length: 246
• Identity: 134/246 - (54%)
• Similarity: 175/246 - (71%)
• Gaps: 26/246 - (10%)

  Fly    86 VVSGGGSGGRE--------NLPSFGFTQEQVACVCEVLQQAGNIERLGRFLWSLP----QCDKLQ 138
            |:..|.|||..        .|||..|:.||||.|||.|::.|:||||||||||||    .|:.:.
 Frog    24 VLLAGSSGGPRAQEELSMFQLPSLNFSPEQVASVCETLEETGDIERLGRFLWSLPVAPGACEAIN 88

  Fly   139 LNESVLKAKAVVAFHRGQYKELYRLLEHHHFSAQNHAKLQALWLKAHYVEAEKLRGRPLGAVGKY 203
            .:||:|:|:||||||.|.:::||.:||:|.|:.::|.||||:||:|||.|||||||||||.|.||
 Frog    89 KHESILRARAVVAFHTGNFRDLYHILENHKFTKESHGKLQAMWLEAHYQEAEKLRGRPLGPVDKY 153

  Fly   204 RVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYSHNPYPSPREKRDLAEATGLTTTQVSNWFKN 268
            |||:||||||||||||:.::||||::||:||:||..:|||:|.:||:||:|||||.|||.|||||
 Frog   154 RVRKKFPLPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKN 218

  Fly   269 RRQRDRAAEHKD-------GSTDKQHL-------DSSSDSEMEGSMLPSQS 305
            ||||||||..|:       |.:..:.|       .||::|....:..|:.|
 Frog   219 RRQRDRAAAAKNRLQHQSIGQSGMRSLADPGCPTHSSAESPSTAAASPTTS 269

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
so	NP_476733.1	SIX1_SD	103..212	CDD:293483	70/112 (63%)
		homeodomain	223..274	CDD:238039	35/50 (70%)
six3	XP_002944388.2	SIX1_SD	49..162	CDD:374862	70/112 (63%)
		homeodomain	170..218	CDD:238039	29/47 (62%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X333
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.910