DRSC/TRiP Functional Genomics Resources

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Protein Alignment ced-9 and Buffy

DIOPT Version :9

Sequence 1:NP_499284.1 Gene:ced-9 / 3565776 WormBaseID:WBGene00000423 Length:280 Species:Caenorhabditis elegans
Sequence 2:NP_523702.1 Gene:Buffy / 36251 FlyBaseID:FBgn0040491 Length:299 Species:Drosophila melanogaster


Alignment Length:307 Identity:58/307 - (18%)
Similarity:110/307 - (35%) Gaps:85/307 - (27%)


- Green bases have known domain annotations that are detailed below.


 Worm    20 MATGEMKEFLGIKGTEPTDFGI---NSDAQDLPSPSRQASTRRMS-IGESIDGKIN---DWEEPR 77
            |||.:.:..|..:......|..   ::...::....::.:.||:| :.:::..|::   .|:..:
  Fly    19 MATTQSERLLQAQNRRKFSFPATLHSASLLEVGGGPKETTRRRLSNVSDAVTRKLSYTIGWKAAQ 83

 Worm    78 LDIEGFVVD-------YFTHRIRQNGM-----------EWFGAPGLPCGVQPEHEMMRVMGTIFE 124
            :..:..:..       |...|:|::|:           ...|:..:.. |:.....::|:|...|
  Fly    84 IPAQDIISQGRCLCGHYIKRRLRRSGLFNKKLGLQRIRSILGSTSMGI-VRDVFPAVQVLGDELE 147

 Worm   125 KKHAENFETFCEQLLAVPRISFSLYQDVVRTV-----GNAQTDQCPMSYGRLIGLISFGGFVAAK 184
            :.|              |||    |..|.|.:     |...|   |.:...|:|.:       .:
  Fly   148 RMH--------------PRI----YNGVARQICRNPGGEFHT---PDAVSLLLGAV-------GR 184

 Worm   185 MMESVELQ-GQVRNLFVYTSLFIKTRIRNNWKEHNRSWDDFMTLGKQMKEDYERAEAEKVGRRKQ 248
            .:..||:. .:|.:||..........:|....|:         |.|.|:...|..|.|.|....:
  Fly   185 ELFRVEITWSKVISLFAIAGGLSVDCVRQGHPEY---------LPKLMESVSEVIEDELVPWINE 240

 Worm   249 NRRWSMIGAGV------------TAGAIGIV-GVVVCG---RMMFSL 279
            |..||.|...|            |...||:| |:::..   |.:|:|
  Fly   241 NGGWSGINTHVLPTTNSLNPLEWTTLVIGVVFGLILVFMILRFIFNL 287

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ced-9NP_499284.1 Bcl-2_like 86..227 CDD:132900 28/164 (17%)
BuffyNP_523702.1 Bcl-2_like 99..250 CDD:132900 39/188 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4728
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S6964
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.760

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