DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Glo1 and glo1

DIOPT Version :9

Sequence 1:NP_610270.1 Gene:Glo1 / 35656 FlyBaseID:FBgn0283450 Length:176 Species:Drosophila melanogaster
Sequence 2:NP_998316.1 Gene:glo1 / 368213 ZFINID:ZDB-GENE-030722-9 Length:180 Species:Danio rerio


Alignment Length:171 Identity:110/171 - (64%)
Similarity:137/171 - (80%) Gaps:0/171 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 GLSNAQADELCQKPDSSTKDFLFQQTMYRIKDPRKSLPFYTGVLGMTLLVKLDFPEAKFSLYFLG 70
            |::|..|...|::..|.||||:.||||.|:|||.|||.|||.:||||||.|.|||..:|:|||||
Zfish     5 GVTNEAAAAACKEGSSITKDFMMQQTMLRVKDPVKSLDFYTRILGMTLLQKFDFPSMRFTLYFLG 69

  Fly    71 YENATDVPKDPKQRRSWALSRKATIELTHNWGTERDPDQNYHTGNTDPRGFGHIGIMVPDVYAAC 135
            ||:..::|.|.|:|.:|..||:||||||||||:|.|..|:||.||:||||||||||.||||||||
Zfish    70 YEDKKEIPADVKERTAWTFSRRATIELTHNWGSETDDSQSYHNGNSDPRGFGHIGIAVPDVYAAC 134

  Fly   136 QRFQELGVDFVKKPDDGRMKGLAFIKDPDGYWIEIFNAHSV 176
            :.|:|.||.||||||:|:|||||||:|||||||||.:.:::
Zfish   135 KLFEENGVTFVKKPDEGKMKGLAFIQDPDGYWIEILSPNNM 175

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Glo1NP_610270.1 Glo_EDI_BRP_like 15..173 CDD:301325 107/157 (68%)
glo1NP_998316.1 Glo_EDI_BRP_like 22..179 CDD:301325 105/154 (68%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170579985
Domainoid 1 1.000 224 1.000 Domainoid score I2490
eggNOG 1 0.900 - - E1_COG0346
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H4880
Inparanoid 1 1.050 245 1.000 Inparanoid score I3271
OMA 1 1.010 - - QHG63488
OrthoDB 1 1.010 - - D1513831at2759
OrthoFinder 1 1.000 - - FOG0003357
OrthoInspector 1 1.000 - - oto39827
orthoMCL 1 0.900 - - OOG6_102622
Panther 1 1.100 - - LDO PTHR10374
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R656
SonicParanoid 1 1.000 - - X3241
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1716.800

Return to query results.
Submit another query.