DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gr43a and Gr8a

DIOPT Version :9

Sequence 1:NP_001286158.1 Gene:Gr43a / 35655 FlyBaseID:FBgn0041243 Length:453 Species:Drosophila melanogaster
Sequence 2:NP_511097.3 Gene:Gr8a / 31865 FlyBaseID:FBgn0030108 Length:385 Species:Drosophila melanogaster


Alignment Length:449 Identity:86/449 - (19%)
Similarity:144/449 - (32%) Gaps:150/449 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 SW-LFTVYSATLTVVMVFLT-----YRGLLFDANSEIPVRASFRMKSATSKVVTALDVSVVVMAI 95
            :| ||.:.|.:..|:....:     |||.:|...::           |...|...|.|..:.:..
  Fly    41 AWSLFLLISLSALVLACLFSGEEFLYRGDMFGCAND-----------ALKYVFAELGVLAIYLET 94

  Fly    96 VS----------------GVYCGLFSLNDTLELNDRLNKIDNTLNAYNNFRRDRWRALGMAAVSL 144
            :|                |...||.||.                :.:..|.|.......|.|.. 
  Fly    95 LSSQRHLANFWWLHFKLGGQKTGLVSLR----------------SEFQQFCRYLIFLYAMMAAE- 142

  Fly   145 LAISILVGLDVGTW--MRIAQDMNIAQSDTELNVHWYIPFYSLYFILTGLQVNIANTAYGLGRRF 207
                  |.:.:|.|  ..:.|.|.:..|..|..| |.....:|.|:| .|:: :.....||.|..
  Fly   143 ------VAIHLGLWQFQALTQHMLLFWSTYEPLV-WLTYLRNLQFVL-HLEL-LREQLTGLEREM 198

  Fly   208 GRLNRMLSSSFLAENNATSAIKPQKVSTVKNVSVNRPAMPSALHASLTKLNGETLPSEAAGDKAA 272
            |.|...  |.|.:|                                    .|.:.|         
  Fly   199 GLLAEY--SRFASE------------------------------------TGRSFP--------- 216

  Fly   273 ARSLILNVELLKLGYFPAKNKGLLLKSLADSH-ESLGKCVHLLSNSFGIAVLFILVSCLLHLVAT 336
                         |:.....:.|:.|....|| ..:.||   ...:|..::|.:|::..:.:...
  Fly   217 -------------GFESFLRRRLVQKQRIYSHVYDMLKC---FQGAFNFSILAVLLTINIRIAVD 265

  Fly   337 AYFLFLELLSKRDNG--YLWVQMLWICFHFLRLLMVVEPCHLAARESRKTIQIVCEIERKVHE-- 397
            .||::..:.:...|.  ||.|..|      |.:     |..:.|  |:..:.:|..|..::|.  
  Fly   266 CYFMYYSIYNNVINNDYYLIVPAL------LEI-----PAFIYA--SQSCMVVVPRIAHQLHNIV 317

  Fly   398 --------PILAEAVKKFWQQLLVVDADFSACGLCRVNRTILTSFASAIATYLVILIQF 448
                    |.|:..::.|..|||.........||..::.::||..|.::.||::..|||
  Fly   318 TDSGCCSCPDLSLQIQNFSLQLLHQPIRIDCLGLTILDCSLLTRMACSVGTYMIYSIQF 376

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gr43aNP_001286158.1 7tm_7 10..449 CDD:285581 86/449 (19%)
Gr8aNP_511097.3 7tm_7 9..376 CDD:285581 84/447 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21143
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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