DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gr43a and Gr28b

DIOPT Version :9

Sequence 1:NP_001286158.1 Gene:Gr43a / 35655 FlyBaseID:FBgn0041243 Length:453 Species:Drosophila melanogaster
Sequence 2:NP_995642.1 Gene:Gr28b / 117496 FlyBaseID:FBgn0045495 Length:470 Species:Drosophila melanogaster


Alignment Length:467 Identity:97/467 - (20%)
Similarity:191/467 - (40%) Gaps:99/467 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 IFYISKVLALAP-YATVRNSKGRVEIGRSWLFTVYSATLTVVMVFLTYRGLLFDANSEIPVRASF 73
            :|:::.:..|.. |.:.....|:..|.:: :|...:..:.:.|....|...::: |.|......|
  Fly    48 VFHVTYIHGLTSFYISCDTKTGKKAIKKT-IFGYINGIMHIAMFVFAYSLTIYN-NCESVASYFF 110

  Fly    74 RMKSATSKVVTALDVSVVVMAIVSG------VYCGLFSLNDTLE-LNDRLNKIDNTLNA------ 125
            |     |::....|    :|.||||      :|...|..|..|| ...:.:.:|..|..      
  Fly   111 R-----SRITYFGD----LMQIVSGFIGVTVIYLTAFVPNHRLERCLQKFHTMDVQLQTVGVKIM 166

  Fly   126 YNNFRRDRWRALGMAAVSLLAISILVGLDVGTWMRIAQDMNIAQSDTELNVHWYIPFYSLYFIL- 189
            |:...|..:    |..:|:..:::|.   .|....:.....:|            |..:|:|.. 
  Fly   167 YSKVLRFSY----MVLISMFLVNVLF---TGGTFSVLYSSEVA------------PTMALHFTFL 212

  Fly   190 ---TGLQVNIANTA---YGLGRRFGRLNRMLSSSFLAENNATSAIKPQKVSTVKNVSVNRPAMPS 248
               |.:.:.||..:   |.:..|...:|::|.:  ||....|.::|          :||:.    
  Fly   213 IQHTVIAIAIALFSCFTYLVEMRLVMVNKVLKN--LAHQWDTRSLK----------AVNQK---- 261

  Fly   249 ALHASLTKLNGETLPSEAAGDKAAARSLILNVELLKLGYFPAKNKGLLLKSLADSHESLGKCVHL 313
              ..||..|:..::.:....|                   ||:    :::...:.|..:.:....
  Fly   262 --QRSLQCLDSFSMYTIVTKD-------------------PAE----IIQESMEIHHLICEAAAT 301

  Fly   314 LSNSFGIAVLFILVSCLLHLVATAYFLFLELL--SKRDNGYLWVQML--WIC---FHFLRLLMVV 371
            .:..|...:|.|:....|.:|..||::...||  |||::.:..|:.:  :.|   .:.:.::.:|
  Fly   302 ANKYFTYQLLTIISIAFLIIVFDAYYVLETLLGKSKRESKFKTVEFVTFFSCQMILYLIAIISIV 366

  Fly   372 EPCHLAARESRKTIQIVCEIERKVHEPILAEAVKKFWQQLLVVDADFSACGLCRVNRTILTSFAS 436
            |..:.|.::|.||..||..:..|.....:.|.:::|..||:.:..:|:|.||..::||:..:.:.
  Fly   367 EGSNRAIKKSEKTGGIVHSLLNKTKSAEVKEKLQQFSMQLMHLKINFTAAGLFNIDRTLYFTISG 431

  Fly   437 AIATYLVILIQF 448
            |:.|||:||:||
  Fly   432 ALTTYLIILLQF 443

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gr43aNP_001286158.1 7tm_7 10..449 CDD:285581 97/467 (21%)
Gr28bNP_995642.1 7tm_7 45..443 CDD:285581 95/465 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_2C1WA
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21143
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.910

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