DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gr43a and Gr22f

DIOPT Version :9

Sequence 1:NP_001286158.1 Gene:Gr43a / 35655 FlyBaseID:FBgn0041243 Length:453 Species:Drosophila melanogaster
Sequence 2:NP_722729.2 Gene:Gr22f / 117349 FlyBaseID:FBgn0041249 Length:378 Species:Drosophila melanogaster


Alignment Length:192 Identity:49/192 - (25%)
Similarity:85/192 - (44%) Gaps:53/192 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   295 LLLKSLADSHESLGKCVHLLSNSFG--IAVLFILVSC---------LLHLVA-TAYFLFLELL-- 345
            |:.::|.|||......:|.|::.:.  :.:..::|:|         :::|:. |....||.:|  
  Fly   205 LVNETLEDSHHLSSSRIHALASLYDRLLKLSELVVACNDLQLILMLIIYLIGNTVQIFFLIVLGV 269

  Fly   346 --SKRDNGYLWV---QMLWICFHFLRLLMVVEPCHLAAR---ESRKTIQIVC-------EIERKV 395
              :||   |:::   ..|.|.|....|.:||  |.||.:   ::.|.:::..       |:||.:
  Fly   270 SMNKR---YIYLVASPQLIINFWDFWLNIVV--CDLAGKCGDQTSKVLKLFTDLEHDDEELERSL 329

  Fly   396 HEPILAEAVKKFWQQLLVVDADFSACGLCRVN-----RTILTSFASAIATYLVILIQFQRTN 452
            :|.......:||         .|..|||..:|     :.|:|||     .|||.|:||...|
  Fly   330 NEFAWLCTHRKF---------RFQLCGLFSINHNMGFQMIITSF-----LYLVYLLQFDFMN 377

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gr43aNP_001286158.1 7tm_7 10..449 CDD:285581 47/187 (25%)
Gr22fNP_722729.2 7tm_7 19..377 CDD:285581 48/190 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21143
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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