DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gr43a and Gr39b

DIOPT Version :9

Sequence 1:NP_001286158.1 Gene:Gr43a / 35655 FlyBaseID:FBgn0041243 Length:453 Species:Drosophila melanogaster
Sequence 2:NP_724336.1 Gene:Gr39b / 117347 FlyBaseID:FBgn0041245 Length:369 Species:Drosophila melanogaster


Alignment Length:422 Identity:80/422 - (18%)
Similarity:147/422 - (34%) Gaps:89/422 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 FLTYRGLLFDANSEIPVRASFRMKSATSKVVTALDVSVVVMAIVSGVYCGL---FSLNDTLELND 114
            :|.|..||    ..:|...|........||.:|      ::.|::.|:.|:   |..:..|.|:.
  Fly     8 YLKYFALL----GLVPWSESCAQSKFVQKVYSA------ILIILNAVHFGISIYFPQSAELFLSL 62

  Fly   115 RLNKIDNTLNAYNNFRRDRWRALGMAAVSLLAISILVGLDVGTWMRIAQDMNI--AQSDTELNVH 177
            .:|.|.....              :..|:::.:.::|..|  .:.|..::|..  .:...||.:|
  Fly    63 MVNVIVFVAR--------------IVCVTVIILQVMVHYD--DYFRFCREMKYLGLRLQCELKIH 111

  Fly   178 -----WYIPFYSLYFILTGLQVNIANTAYGLGRRFGRLNRMLSSS---FLAENNATSAIKPQKVS 234
                 |. .:..:..:..|..|.:..:.|          ..||.|   |.:...:...|:.|.|.
  Fly   112 VGRLKWQ-SYAKILALGIGFLVTVLPSIY----------VALSGSLLYFWSSLLSILIIRMQFVL 165

  Fly   235 TVKNVSVNRPAMPSALHASL------TKLNGETLPSEAAGDKAAARSLILNVELLKLGYFPAKNK 293
            .:.||.:      ...|.||      ..|....:.:....|..|.|...|.              
  Fly   166 VLLNVEL------LGHHVSLLGIRLQNVLECHLMGANCTLDGNANRLCSLE-------------- 210

  Fly   294 GLLLKSLADSHESLGKCVHLLSNSFGIAVLFILVSCLLHLVATAYFLFLELLSKRDNGYLWVQML 358
              .|.:|..||..|.......::.||.::|...|..........|:....|:...:..||:....
  Fly   211 --FLLALKQSHMQLHYLFTHFNDLFGWSILGTYVVLFSDSTVNIYWTQQVLVEVYEYKYLYATFS 273

  Fly   359 WICFHFLRLLMVVEPCHLAARES------RKTIQIVCEIERKV-HEPILAEAVKKFWQQLLVVDA 416
            .....|..:|:.........|:|      .:.:.....|.|:. ::.:|.|.:.:..|.:|.::|
  Fly   274 VFVPSFFNILVFCRCGEFCQRQSVLIGSYLRNLSCHPSIGRETSYKDLLMEFILQVEQNVLAINA 338

  Fly   417 DFSACGLCRVNRTILTSFASAIATYLVILIQF 448
            :    |....:.::|.|..:|..|||::|:||
  Fly   339 E----GFMSTDNSLLMSILAAKVTYLIVLMQF 366

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gr43aNP_001286158.1 7tm_7 10..449 CDD:285581 80/422 (19%)
Gr39bNP_724336.1 7tm_7 5..367 CDD:303125 80/422 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21143
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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