DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dhx15 and hrpB

DIOPT Version :10

Sequence 1:NP_610269.1 Gene:Dhx15 / 35654 FlyBaseID:FBgn0033160 Length:729 Species:Drosophila melanogaster
Sequence 2:NP_414690.4 Gene:hrpB / 944845 ECOCYCID:EG12329 Length:809 Species:Escherichia coli


Alignment Length:543 Identity:179/543 - (32%)
Similarity:279/543 - (51%) Gaps:72/543 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    71 ALPVFEYQADFMRLLSLHQCIVLVGETGSGKTTQIPQWCVDFAVSKGRKG-VSCTQPRRVAAMSV 134
            :|||.....:.:..|.....::|...||:||:|.:|   :......|..| :...:|||:||.:|
E. coli     3 SLPVAAVLPELLTALDCAPQVLLSAPTGAGKSTWLP---LQLLAHPGINGKIILLEPRRLAARNV 64

  Fly   135 AQRVSEEMDVKLGEEVGYSIRFEDCSTAKTLLKYMTDGMLLREAMSDPMLDQYQVILLDEAHERT 199
            |||::|.::.|.|:.|||.:|.::|....|.|:.:|:|:|.|....||.|....:::|||.|||:
E. coli    65 AQRLAELLNEKPGDTVGYRMRAQNCVGPNTRLEVVTEGVLTRMIQRDPELSGVGLVILDEFHERS 129

  Fly   200 LATDILMGVLKEVIR-QRSDLKLVVMSATLDAGKFQQYFDNAPLMKVPGRTHPVEIFYTPEPERD 263
            |..|:.:.:|.:|.: .|.||||::||||||..:.||....||::...||:.|||..|.|.|...
E. coli   130 LQADLALALLLDVQQGLRDDLKLLIMSATLDNDRLQQMLPEAPVVISEGRSFPVERRYLPLPAHQ 194

  Fly   264 YLEAAIRTVIQIHMCEEIEGDILMFLTGQEEIEEACKRIKREI-DNLGSEIGELKCIPLYSTLPP 327
            ..:.|: .|....|..:..|.:|:||.|..||:    |::.:: ..:||::  |.| |||..|..
E. coli   195 RFDDAV-AVATAEMLRQESGSLLLFLPGVGEIQ----RVQEQLASRIGSDV--LLC-PLYGALSL 251

  Fly   328 NLQQRIFEPAPPPNANGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKV--YNPRIRVESLL 390
            |.|::...|||    .|.  ||||::||||||||||:|:..|:|  .|:::|  ::||..:..|:
E. coli   252 NDQRKAILPAP----QGM--RKVVLATNIAETSLTIEGIRLVVD--CAQERVARFDPRTGLTRLI 308

  Fly   391 VSPISKASAQQRSGRAGRTRPGKCFRLYT-EKAFKNEMQDNTYPEILRSNLGTVVLQLKKLGIDD 454
            ...:|:||..||:|||||..||....|.. |:|.:...|..  ||||:|:|..::::|.:.|..|
E. coli   309 TQRVSQASMTQRAGRAGRLEPGISLHLIAKEQAERAAAQSE--PEILQSDLSGLLMELLQWGCSD 371

  Fly   455 LVHFDFMDPPAPETLMRALELLNYLAALDDDGNLTDLGAVMSEFPLDPQLAKMLIASCQHNCSNE 519
            .....::|.|....|:.|..||..|.||:.: .|:..|..|:....||:||.||:::...:.:..
E. coli   372 PAQMSWLDQPPVVNLLAAKRLLQMLGALEGE-RLSAQGQKMAALGNDPRLAAMLVSAKNDDEAAT 435

  Fly   520 ILSITAMLSVPQCFVRPNEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQSSEDPNWCYENFINF 584
            ...|.|:|..|.                 |..:.|      |.|  ||  |...|.|        
E. coli   436 AAKIAAILEEPP-----------------RMGNSD------LGV--AF--SRNQPAW-------- 465

  Fly   585 RSLKSADNVRQQLARIMDRFNLR 607
                     :|:..:::.|.|:|
E. coli   466 ---------QQRSQQLLKRLNVR 479

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dhx15NP_610269.1 HrpA 71..>691 CDD:441249 179/543 (33%)
hrpBNP_414690.4 PRK11664 1..809 CDD:236950 179/543 (33%)

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