DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dhx15 and PRP22

DIOPT Version :9

Sequence 1:NP_001260766.1 Gene:Dhx15 / 35654 FlyBaseID:FBgn0033160 Length:729 Species:Drosophila melanogaster
Sequence 2:NP_010929.3 Gene:PRP22 / 856732 SGDID:S000000815 Length:1145 Species:Saccharomyces cerevisiae


Alignment Length:665 Identity:316/665 - (47%)
Similarity:448/665 - (67%) Gaps:23/665 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 TNTPYSQRYQNLYKKRIALPVFEYQADFMRLLSLHQCIVLVGETGSGKTTQIPQWCVDFAVSK-G 117
            |:.|.|.:.|       .|||:..:::.::.:..:|.:|:||||||||||||.|:..:...|. |
Yeast   472 TSLPISAQRQ-------TLPVYAMRSELIQAVRDNQFLVIVGETGSGKTTQITQYLDEEGFSNYG 529

  Fly   118 RKGVSCTQPRRVAAMSVAQRVSEEMDVKLGEEVGYSIRFEDCSTAKTLLKYMTDGMLLREAMSDP 182
            .  :.|||||||||:|||:||:||:..|:|.:|||:|||||.:...|.:||||||||.|||:.||
Yeast   530 M--IGCTQPRRVAAVSVAKRVAEEVGCKVGHDVGYTIRFEDVTGPDTRIKYMTDGMLQREALLDP 592

  Fly   183 MLDQYQVILLDEAHERTLATDILMGVLKEVIRQRSDLKLVVMSATLDAGKFQQYFDNAPLMKVPG 247
            .:.:|.||:||||||||:|||:|..:||:...:|.:||::|.||||::.||.:||.|.|::.:||
Yeast   593 EMSKYSVIMLDEAHERTVATDVLFALLKKAAIKRPELKVIVTSATLNSAKFSEYFLNCPIINIPG 657

  Fly   248 RTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEIEGDILMFLTGQEEIEEACKRIKREIDNLGSE 312
            :|.|||:.|:..|:.||:|||:..||.||: .|..||||:||||||||:..|:.:...:..||..
Yeast   658 KTFPVEVLYSQTPQMDYIEAALDCVIDIHI-NEGPGDILVFLTGQEEIDSCCEILYDRVKTLGDS 721

  Fly   313 IGELKCIPLYSTLPPNLQQRIFEPAPPPNANGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQ 377
            ||||..:|:||.||..:|.:||||.|..:      ||||.:|||||||:||||:.:|:||||||.
Yeast   722 IGELLILPVYSALPSEIQSKIFEPTPKGS------RKVVFATNIAETSITIDGIYYVVDPGFAKI 780

  Fly   378 KVYNPRIRVESLLVSPISKASAQQRSGRAGRTRPGKCFRLYTEKAFKNEMQDNTYPEILRSNLGT 442
            .:||.|..:|.|:|||||:|.|.||.||||||.||||:|||||.||.|||.:||.|||.|.||..
Yeast   781 NIYNARAGIEQLIVSPISQAQANQRKGRAGRTGPGKCYRLYTESAFYNEMLENTVPEIQRQNLSH 845

  Fly   443 VVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALDDDGNLTDLGAVMSEFPLDPQLAKM 507
            .:|.||.:||:||:.|||||||....::.||..|.:|.:|||:|.||:||..||.||:||.|::.
Yeast   846 TILMLKAMGINDLLKFDFMDPPPKNLMLNALTELYHLQSLDDEGKLTNLGKEMSLFPMDPTLSRS 910

  Fly   508 LIASCQHNCSNEILSITAMLSVPQCFVRPNEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQSSE 572
            |::|..:.||:||::|.:||||...|.||.:.:..||..|.:|.|..||||||||||..::|::.
Yeast   911 LLSSVDNQCSDEIVTIISMLSVQNVFYRPKDRQLEADSKKAKFHHPYGDHLTLLNVYTRWQQANY 975

  Fly   573 DPNWCYENFINFRSLKSADNVRQQLARIMDRFNLRRTSTEFTSKDYYVNIRKALVQGFFMQVAHL 637
            ...:|..||::||.||.|.:|:.|::.|..:..|:..|.. :..|.   |||..|.||||..|..
Yeast   976 SEQYCKTNFLHFRHLKRARDVKSQISMIFKKIGLKLISCH-SDPDL---IRKTFVSGFFMNAAKR 1036

  Fly   638 ERTGYYLTIKDNQNVQLHPSTCLDHKP-DWVIYNEFVLTTKNYIRTVTDVKPEWLCCLAPQYYDL 701
            :....|.||.....|.:|||:.|..|. ::|:|:..|||::.|:..||.::|:||..:||.:|..
Yeast  1037 DSQVGYKTINGGTEVGIHPSSSLYGKEYEYVMYHSIVLTSREYMSQVTSIEPQWLLEVAPHFYKA 1101

  Fly   702 NNFPQCEAKRQLELL 716
            .: .:.:::::.:::
Yeast  1102 GD-AESQSRKKAKII 1115

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dhx15NP_001260766.1 Motor_domain 50..>102 CDD:277568 16/47 (34%)
DEXDc 67..255 CDD:214692 97/188 (52%)
DEXDc 91..228 CDD:238005 79/137 (58%)
HELICc 315..408 CDD:197757 52/92 (57%)
HA2 478..561 CDD:214852 40/82 (49%)
OB_NTP_bind 595..698 CDD:285018 36/103 (35%)
PRP22NP_010929.3 Pnp 1..423 CDD:224106
HrpA 456..1145 CDD:224557 316/665 (48%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1643
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53574
OrthoFinder 1 1.000 - - FOG0000059
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100085
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X141
TreeFam 00.000 Not matched by this tool.
65.720

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